Combiner and HyperCombiner networks: Rules to combine multimodality MR images for prostate cancer localisation.


Journal

Medical image analysis
ISSN: 1361-8423
Titre abrégé: Med Image Anal
Pays: Netherlands
ID NLM: 9713490

Informations de publication

Date de publication:
Jan 2024
Historique:
received: 28 09 2022
revised: 22 09 2023
accepted: 13 11 2023
medline: 17 12 2023
pubmed: 24 11 2023
entrez: 23 11 2023
Statut: ppublish

Résumé

One of the distinct characteristics of radiologists reading multiparametric prostate MR scans, using reporting systems like PI-RADS v2.1, is to score individual types of MR modalities, including T2-weighted, diffusion-weighted, and dynamic contrast-enhanced, and then combine these image-modality-specific scores using standardised decision rules to predict the likelihood of clinically significant cancer. This work aims to demonstrate that it is feasible for low-dimensional parametric models to model such decision rules in the proposed Combiner networks, without compromising the accuracy of predicting radiologic labels. First, we demonstrate that either a linear mixture model or a nonlinear stacking model is sufficient to model PI-RADS decision rules for localising prostate cancer. Second, parameters of these combining models are proposed as hyperparameters, weighing independent representations of individual image modalities in the Combiner network training, as opposed to end-to-end modality ensemble. A HyperCombiner network is developed to train a single image segmentation network that can be conditioned on these hyperparameters during inference for much-improved efficiency. Experimental results based on 751 cases from 651 patients compare the proposed rule-modelling approaches with other commonly-adopted end-to-end networks, in this downstream application of automating radiologist labelling on multiparametric MR. By acquiring and interpreting the modality combining rules, specifically the linear-weights or odds ratios associated with individual image modalities, three clinical applications are quantitatively presented and contextualised in the prostate cancer segmentation application, including modality availability assessment, importance quantification and rule discovery.

Identifiants

pubmed: 37995627
pii: S1361-8415(23)00290-6
doi: 10.1016/j.media.2023.103030
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

103030

Subventions

Organisme : Cancer Research UK
ID : 31378
Pays : United Kingdom

Informations de copyright

Copyright © 2023 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Wen Yan (W)

Department of Electrical Engineering, City University of Hong Kong, 83 Tat Chee Avenue, Hong Kong China; Centre for Medical Image Computing; Department of Medical Physics & Biomedical Engineering; Wellcome/EPSRC Centre for Interventional and Surgical Sciences, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: wenyan6-c@my.cityu.edu.hk.

Bernard Chiu (B)

Department of Electrical Engineering, City University of Hong Kong, 83 Tat Chee Avenue, Hong Kong China; Department of Physics & Computer Science, Wilfrid Laurier University, 75 University Avenue West Waterloo, Ontario N2L 3C5, Canada. Electronic address: bchiu@wlu.ca.

Ziyi Shen (Z)

Centre for Medical Image Computing; Department of Medical Physics & Biomedical Engineering; Wellcome/EPSRC Centre for Interventional and Surgical Sciences, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: ziyi-shen@ucl.ac.uk.

Qianye Yang (Q)

Centre for Medical Image Computing; Department of Medical Physics & Biomedical Engineering; Wellcome/EPSRC Centre for Interventional and Surgical Sciences, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: qianye.yang.19@ucl.ac.uk.

Tom Syer (T)

Centre for Medical Imaging, Division of Medicine, University College London, London W1 W 7TS, UK. Electronic address: t.syer@ucl.ac.uk.

Zhe Min (Z)

Centre for Medical Image Computing; Department of Medical Physics & Biomedical Engineering; Wellcome/EPSRC Centre for Interventional and Surgical Sciences, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: z.min@ucl.ac.uk.

Shonit Punwani (S)

Centre for Medical Imaging, Division of Medicine, University College London, London W1 W 7TS, UK. Electronic address: s.punwani@ucl.ac.uk.

Mark Emberton (M)

Division of Surgery & Interventional Science, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: m.emberton@ucl.ac.uk.

David Atkinson (D)

Centre for Medical Imaging, Division of Medicine, University College London, London W1 W 7TS, UK. Electronic address: d.atkinson@ucl.ac.uk.

Dean C Barratt (DC)

Centre for Medical Image Computing; Department of Medical Physics & Biomedical Engineering; Wellcome/EPSRC Centre for Interventional and Surgical Sciences, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: d.barratt@ucl.ac.uk.

Yipeng Hu (Y)

Centre for Medical Image Computing; Department of Medical Physics & Biomedical Engineering; Wellcome/EPSRC Centre for Interventional and Surgical Sciences, University College London, Gower St, WC1E 6BT, London, UK. Electronic address: yipeng.hu@ucl.ac.uk.

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Classifications MeSH