A Systematic Review and Critical Assessment of Breast Cancer Risk Prediction Tools Incorporating a Polygenic Risk Score for the General Population.

breast cancer non-genetic risk factors polygenic risk score (PRS) risk prediction tools systematic review

Journal

Cancers
ISSN: 2072-6694
Titre abrégé: Cancers (Basel)
Pays: Switzerland
ID NLM: 101526829

Informations de publication

Date de publication:
12 Nov 2023
Historique:
received: 15 09 2023
revised: 26 10 2023
accepted: 03 11 2023
medline: 25 11 2023
pubmed: 25 11 2023
entrez: 25 11 2023
Statut: epublish

Résumé

Single nucleotide polymorphisms (SNPs) in the form of a polygenic risk score (PRS) have emerged as a promising factor that could improve the predictive performance of breast cancer (BC) risk prediction tools. This study aims to appraise and critically assess the current evidence on these tools. Studies were identified using Medline, EMBASE and the Cochrane Library up to November 2022 and were included if they described the development and/ or validation of a BC risk prediction model using a PRS for women of the general population and if they reported a measure of predictive performance. We identified 37 articles, of which 29 combined genetic and non-genetic risk factors using seven different risk prediction tools. Most models (55.0%) were developed on populations from European ancestry and performed better than those developed on populations from other ancestry groups. Regardless of the number of SNPs in each PRS, models combining a PRS with genetic and non-genetic risk factors generally had better discriminatory accuracy (AUC from 0.52 to 0.77) than those using a PRS alone (AUC from 0.48 to 0.68). The overall risk of bias was considered low in most studies. BC risk prediction tools combining a PRS with genetic and non-genetic risk factors provided better discriminative accuracy than either used alone. Further studies are needed to cross-compare their clinical utility and readiness for implementation in public health practices.

Identifiants

pubmed: 38001640
pii: cancers15225380
doi: 10.3390/cancers15225380
pmc: PMC10670420
pii:
doi:

Types de publication

Journal Article Review

Langues

eng

Subventions

Organisme : CIHR
ID : 155865
Pays : Canada

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Auteurs

Cynthia Mbuya-Bienge (C)

Department of Social and Preventive Medicine, Faculty of Medicine, Université Laval, Quebec City, QC G1V 0A6, Canada.
Oncology Division, CHU de Québec-Université Laval Research Center, Quebec City, QC G1S 4L8, Canada.

Nora Pashayan (N)

Department of Applied Health Research, University College London, London WC1E 6BT, UK.

Cornelia D Kazemali (CD)

Department of Social and Preventive Medicine, Faculty of Medicine, Université Laval, Quebec City, QC G1V 0A6, Canada.
Oncology Division, CHU de Québec-Université Laval Research Center, Quebec City, QC G1S 4L8, Canada.

Julie Lapointe (J)

Oncology Division, CHU de Québec-Université Laval Research Center, Quebec City, QC G1S 4L8, Canada.

Jacques Simard (J)

Endocrinology and Nephology Division, CHU de Québec-Université Laval Research Center, Quebec City, QC G1V 4G2, Canada.
Department of Molecular Medicine, Faculty of Medicine, Université Laval, Quebec City, QC G1V 0A6, Canada.

Hermann Nabi (H)

Department of Social and Preventive Medicine, Faculty of Medicine, Université Laval, Quebec City, QC G1V 0A6, Canada.
Oncology Division, CHU de Québec-Université Laval Research Center, Quebec City, QC G1S 4L8, Canada.

Classifications MeSH