Consensus Tree Under the Ancestor-Descendant Distance is NP-Hard.

cancer consensus tree infinite sites assumption intra-tumor heterogeneity

Journal

Journal of computational biology : a journal of computational molecular cell biology
ISSN: 1557-8666
Titre abrégé: J Comput Biol
Pays: United States
ID NLM: 9433358

Informations de publication

Date de publication:
28 Nov 2023
Historique:
medline: 27 11 2023
pubmed: 27 11 2023
entrez: 27 11 2023
Statut: aheadofprint

Résumé

Due to uncertainty in tumor phylogeny inference from sequencing data, many methods infer multiple, equally plausible phylogenies for the same cancer. To summarize the solution space

Identifiants

pubmed: 38010616
doi: 10.1089/cmb.2023.0262
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1-14

Auteurs

Yuanyuan Qi (Y)

Department of Computer Science, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.

Mohammed El-Kebir (M)

Department of Computer Science, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.
Cancer Center at Illinois, University of Illinois Urbana-Champaign, Urbana, Illinois, USA.

Classifications MeSH