Species-specific gill's microbiome of eight crab species with different breathing adaptations.
Journal
Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288
Informations de publication
Date de publication:
29 Nov 2023
29 Nov 2023
Historique:
received:
03
07
2023
accepted:
24
11
2023
medline:
1
12
2023
pubmed:
30
11
2023
entrez:
29
11
2023
Statut:
epublish
Résumé
Transitions to physically different environments, such as the water-to-land transition, proved to be the main drivers of relevant evolutionary events. Brachyuran crabs evolved remarkable morphological, behavioral, and physiological adaptations to terrestrial life. Terrestrial species evolved new respiratory structures devoted to replace or support the gills, a multifunctional organ devoted to gas exchanges, ion-regulation and nitrogen excretion. It was hypothesized that microorganisms associated with respiratory apparatus could have facilitated the processes of osmoregulation, respiration, and elimination of metabolites along this evolutionary transition. To test if crab species with different breathing adaptations may host similar microbial communities on their gills, we performed a comparative targeted-metagenomic analysis, selecting two marine and six terrestrial crabs belonging to different families and characterised by different breathing adaptations. We analysed anterior and posterior gills separately according to their different and specific roles. Regardless of their terrestrial or marine adaptations, microbial assemblages were strongly species-specific indicating a non-random association between the host and its microbiome. Significant differences were found in only two terrestrial species when considering posterior vs. anterior gills, without any association with species-specific respiratory adaptations. Our results suggest that all the selected species are strongly adapted to the ecological niche and specific micro-habitat they colonise.
Identifiants
pubmed: 38030652
doi: 10.1038/s41598-023-48308-w
pii: 10.1038/s41598-023-48308-w
pmc: PMC10687215
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
21033Subventions
Organisme : Hong Kong Government
ID : 207080320.088562.26020.430.01
Organisme : TUYF Charitable Trust funds, Hong Kong
ID : 260008686.088562.26000.400.01
Organisme : Ministero dell'Istruzione, dell'Università e della Ricerca
ID : CN00000033
Informations de copyright
© 2023. The Author(s).
Références
Front Physiol. 2012 Nov 15;3:431
pubmed: 23162474
Oecologia. 2001 Oct;129(2):271-280
pubmed: 28547606
Proc Biol Sci. 2014 Mar 11;281(1782):20132927
pubmed: 24619438
J Exp Biol. 2001 Mar;204(Pt 5):979-89
pubmed: 11171421
Front Microbiol. 2023 Jun 12;14:1113617
pubmed: 37378290
Front Microbiol. 2022 Jan 20;12:781156
pubmed: 35126327
Front Microbiol. 2020 Oct 07;11:575372
pubmed: 33117320
BMC Ecol Evol. 2021 Sep 23;21(1):180
pubmed: 34556035
Biomed Res Int. 2014;2014:436056
pubmed: 24991552
Innovation (Camb). 2023 Feb 02;4(2):100388
pubmed: 36895758
mSystems. 2021 Oct 26;6(5):e0091721
pubmed: 34636669
Environ Microbiol. 2021 Jul;23(7):3957-3969
pubmed: 33200556
Nat Methods. 2016 Jul;13(7):581-3
pubmed: 27214047
PLoS One. 2017 Feb 9;12(2):e0171870
pubmed: 28182764
Nat Ecol Evol. 2018 Jun;2(6):936-943
pubmed: 29662222
Genome Biol. 2014;15(12):550
pubmed: 25516281
PLoS One. 2022 Apr 14;17(4):e0266977
pubmed: 35421185
mSystems. 2021 Jan 12;6(1):
pubmed: 33436514
Nat Microbiol. 2022 Jun;7(6):810-819
pubmed: 35618773
J Exp Biol. 1994 Feb;187(1):113-30
pubmed: 9317443
Biol Rev Camb Philos Soc. 2009 May;84(2):203-23
pubmed: 19391202
J Bacteriol. 2013 May;195(10):2207-11
pubmed: 23475964
J Exp Biol. 2004 Dec;207(Pt 26):4491-504
pubmed: 15579545
Arthropod Struct Dev. 2015 Nov;44(6 Pt B):622-9
pubmed: 26431635
Ecology. 2012 Dec;93(12):2533-47
pubmed: 23431585
J Morphol. 1993 Mar;215(3):245-260
pubmed: 29865443
Nucleic Acids Res. 2013 Jan;41(Database issue):D590-6
pubmed: 23193283
Nutrients. 2023 May 02;15(9):
pubmed: 37432374
Oecologia. 2019 Jan;189(1):79-89
pubmed: 30421005
FEMS Microbiol Rev. 2008 Aug;32(5):723-35
pubmed: 18549407
Microbiome. 2023 Aug 24;11(1):189
pubmed: 37612775
Mol Ecol Resour. 2019 Jul;19(4):804-817
pubmed: 30947383
Genome Biol. 2011 Jun 24;12(6):R60
pubmed: 21702898
Comp Biochem Physiol A Mol Integr Physiol. 2008 Nov;151(3):272-304
pubmed: 17604200
Bioinformatics. 2017 Sep 15;33(18):2938-2940
pubmed: 28645171
Curr Biol. 2020 Oct 5;30(19):R1176-R1188
pubmed: 33022263
Philos Trans R Soc Lond B Biol Sci. 2016 Jul 19;371(1699):
pubmed: 27325830
mSystems. 2016 Mar 29;1(2):
pubmed: 27822520
mBio. 2019 Feb 5;10(1):
pubmed: 30723123