Resolution enhancement, noise suppression, and joint T2* decay estimation in dual-echo sodium-23 MR imaging using anatomically guided reconstruction.
anatomical priors
brain
iterative reconstruction
quantification
sodium MR
Journal
Magnetic resonance in medicine
ISSN: 1522-2594
Titre abrégé: Magn Reson Med
Pays: United States
ID NLM: 8505245
Informations de publication
Date de publication:
03 Dec 2023
03 Dec 2023
Historique:
revised:
03
11
2023
received:
03
07
2023
accepted:
04
11
2023
medline:
4
12
2023
pubmed:
4
12
2023
entrez:
4
12
2023
Statut:
aheadofprint
Résumé
Sodium MRI is challenging because of the low tissue concentration of the The proposed framework was evaluated using reconstructions of 30 noise realizations of realistic simulations of dual echo twisted projection imaging (TPI) Our simulations show that compared to conventional reconstructions, AGR and AGRdm show improved bias-noise characteristics in several regions of the brain. Moreover, AGR and AGRdm images show more anatomical detail and less noise in the reconstructions of the experimental data sets. Compared to AGR and the conventional reconstruction, AGRdm shows higher contrast in the sodium concentration ratio between gray and white matter and between gray matter and the brain stem. AGR and AGRdm generate
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : NIH HHS
ID : R01- EB029306
Pays : United States
Organisme : NIH HHS
ID : R01-EB031199
Pays : United States
Organisme : NIH HHS
ID : R01-NS113517
Pays : United States
Organisme : NIH HHS
ID : RF1-AG067502
Pays : United States
Informations de copyright
© 2023 International Society for Magnetic Resonance in Medicine.
Références
Ouwerkerk R, Bleich KB, Gillen JS, Pomper MG, Bottomley PA. Tissue sodium concentration in human brain tumors as measured with 23Na MR imaging. Radiology. 2003;227:529-537.
Bartha R, Megyesi JF, Watling CJ. Low-grade glioma: correlation of short echo time 1H-MR spectroscopy with 23Na MR imaging. Ajnr Am J Neuroradiol. 2008;29:464-470.
Hussain MS, Stobbe RW, Bhagat YA, et al. Sodium imaging intensity increases with time after human ischemic stroke. Ann Neurol. 2009;66:55-62.
Boada FE, Qian Y, Nemoto E, et al. Sodium MRI and the assessment of irreversible tissue damage during hyper-acute stroke. Transl Stroke Res. 2012;3:236-245.
Mellon EA, Pilkinton DT, Clark CM, et al. Sodium MR imaging detection of mild Alzheimer disease: preliminary study. Am J Neuroradiol. 2009;30:978-984.
Mohamed SA, Herrmann K, Adlung A, et al. Evaluation of sodium (23Na) MR-imaging as a biomarker and predictor for neurodegenerative changes in patients with Alzheimer's disease. In Vivo. 2021;35:429-435.
Haeger A, Boumezbeur F, Bottlaender M, et al. 3T sodium MR imaging in Alzheimer's disease shows stage-dependent sodium increase influenced by age and local brain volume. NeuroImage Clin. 2022;36:103274.
Madelin G, Regatte RR. Biomedical applications of sodium MRI in vivo. J Magn Reson Imaging. 2013;38:511-529.
Shah NJ, Worthoff WA, Langen KJ. Imaging of sodium in the brain: a brief review. NMR Biomed. 2016;29:162-174.
Thulborn KR. Quantitative sodium MR imaging: a review of its evolving role in medicine. Neuroimage. 2018;168:250-268.
Hagiwara A, Bydder M, Oughourlian TC, et al. Sodium MR neuroimaging. Ajnr Am J Neuroradiol. 2021;42:1920-1926.
Stobbe RW, Beaulieu C. Calculating potential error in sodium MRI with respect to the analysis of small objects. Magn Reson Med. 2018;79:2968-2977.
Fessler JA, Clinthorne NH, Rogers WL. Regularized emission image reconstruction using imperfect side information. IEEE Trans Nucl Sci. 1992;39:1464-1471. Conference Name: IEEE Transactions on Nuclear Science.
Lipinski B, Herzog H, Rota Kops E, Oberschelp W, Muller-Gartner HW. Expectation maximization reconstruction of positron emission tomography images using anatomical magnetic resonance information. IEEE Trans Med Imaging. 1997;16:129-136.
Baete K, Nuyts J, Van Paesschen W, Suetens P, Dupont P. Anatomical-based FDG-PET reconstruction for the detection of hypo-metabolic regions in epilepsy. IEEE Trans Med Imaging. 2004;23:510-519.
Bowsher JE, Yuan H, Hedlund LW, et al. Utilizing MRI information to estimate F18-FDG distributions in rat flank tumors. Paper presented at: IEEE Symposium Conference Record Nuclear Science 2004. 2004; Rome, Italy:2488-2492.
Vunckx K, Atre A, Baete K, et al. Evaluation of three MRI-based anatomical priors for quantitative PET brain imaging. IEEE Trans Med Imaging. 2012;31:599-612.
Knoll F, Holler M, Koesters T, Otazo R, Bredies K, Sodickson DK. Joint MR-PET reconstruction using a multi-channel image regularizer. IEEE Trans Med Imaging. 2017;36:1-16.
Ehrhardt MJ, Markiewicz P, Liljeroth M, et al. PET reconstruction with an anatomical MRI prior using parallel level sets. IEEE Trans Med Imaging. 2016;35:2189-2199.
Schramm G, Holler M, Rezaei A, et al. Evaluation of parallel level sets and Bowsher's method as segmentation-free anatomical priors for time-of-flight PET reconstruction. IEEE Trans Med Imaging. 2018;37:590-603.
Liang Z-P, Lauterbur PC. A generalized series approach to MR spectroscopic imaging. IEEE Trans Med Imaging. 1991;10:132-137.
Haldar JP, Hernando D, Song SK, Liang ZP. Anatomically constrained reconstruction from noisy data. Magn Reson Med. 2008;59:810-818.
Ehrhardt MJ, Betcke MM. Multicontrast MRI reconstruction with structure-guided Total variation. SIAM J Imag Sci. 2016;9:1084-1106.
Gnahm C, Nagel AM. Anatomically weighted second-order total variation reconstruction of 23Na MRI using prior information from 1H MRI. Neuroimage. 2015;105:452-461.
Zhao Y, Guo R, Li Y, Thulborn KR, Liang ZP. High-resolution sodium imaging using anatomical and sparsity constraints for denoising and recovery of novel features. Magn Reson Med. 2021;86:625-636.
Ehrhardt MJ, Gallagher FA, McLean MA, Schönlieb CB. Enhancing the spatial resolution of hyperpolarized carbon-13 MRI of human brain metabolism using structure guidance. Magn Reson Med. 2022;87:1301-1312.
Fessler JA, Sutton BP. Nonuniform fast Fourier transforms using min-max interpolation. IEEE Trans Signal Process. 2003;51:560-574.
Noll DC, Meyer CH, Pauly JM, Nishimura DG, Macovski A. A homogeneity correction method for magnetic resonance imaging with time-varying gradients. IEEE Trans Med Imaging. 1991;10:629-637.
Noll DC, Pauly JM, Meyer CH, Nishimura DG, Macovskj A. Deblurring for non-2D fourier transform magnetic resonance imaging. Magn Reson Med. 1992;25:319-333.
Ehrhardt MJ. Multi-Modality Imaging with Structure-Promoting Regularizers:1-38. Springer International Publishing; 2021.
Collins DL, Zijdenbos AP, Kollokian V, et al. Design and construction of a realistic digital brain phantom. IEEE Trans Med Imaging. 1998;17:463-468.
Boada FE, Gillen JS, Shen GX, Chang SY, Thulborn KR. Fast three dimensional sodium imaging. Magn Reson Med. 1997;37:706-715.
Chambolle A, Pock T. A first-order primal-dual algorithm for convex problems with applications to imaging. J Math Imag Vis. 2011;40:120-145.
Chambolle A, Ehrhardt MJ, Richtárik P, Schönlieb CB. Stochastic primal-dual hybrid gradient algorithm with arbitrary sampling and imaging applications. SIAM J Optim. 2018;28:2783-2808.
Lommen J, Konstandin S, Krämer P, Schad LR. Enhancing the quantification of tissue sodium content by MRI: time-efficient sodium B1 mapping at clinical field strengths. NMR Biomed. 2016;29:129-136.
Morrell GR. A phase-sensitive method of flip angle mapping. Magn Reson Med. 2008;60:889-894.
Sacolick LI, Wiesinger F, Hancu I, Vogel MW. B1 mapping by Bloch-Siegert shift. Magn Reson Med. 2010;63:1315-1322.
Insko EK, Bolinger L. Mapping of the radiofrequency field. J Magn Reson A. 1993;103:82-85.
Irarrazabal P, Meyer CH, Nishimura DG, Macovski A. Inhomogeneity correction using an estimated linear field map. Magn Reson Med. 1996;35:278-282.