Processing of matched and mismatched rNMPs in DNA by archaeal ribonucleotide excision repair.
Bacteriology
Biochemistry
Molecular biology
Journal
iScience
ISSN: 2589-0042
Titre abrégé: iScience
Pays: United States
ID NLM: 101724038
Informations de publication
Date de publication:
15 Dec 2023
15 Dec 2023
Historique:
received:
11
07
2023
revised:
05
10
2023
accepted:
14
11
2023
medline:
11
12
2023
pubmed:
11
12
2023
entrez:
11
12
2023
Statut:
epublish
Résumé
Ribonucleoside monophosphates (rNMPs) are the main non-canonical nucleotides in genomic DNA, and their incorporation can occur as mismatches or matches
Identifiants
pubmed: 38077150
doi: 10.1016/j.isci.2023.108479
pii: S2589-0042(23)02556-7
pmc: PMC10698281
doi:
Types de publication
Journal Article
Langues
eng
Pagination
108479Informations de copyright
© 2023 The Author(s).
Déclaration de conflit d'intérêts
The authors declare no competing interests.
Références
EMBO J. 2000 Jul 17;19(14):3811-21
pubmed: 10899134
J Biol Chem. 1997 Sep 5;272(36):22591-9
pubmed: 9278414
Biochemistry. 1996 Jul 16;35(28):9266-77
pubmed: 8703932
J Mol Biol. 2007 Oct 5;372(5):1137-48
pubmed: 17720188
Mol Cell. 2013 Mar 7;49(5):1010-5
pubmed: 23375499
Biochem J. 2012 Oct 15;447(2):271-80
pubmed: 22849643
Genes (Basel). 2018 Feb 07;9(2):
pubmed: 29414865
Mutat Res. 2014 Mar;761:21-33
pubmed: 24495324
J Mol Biol. 2018 Dec 7;430(24):4908-4924
pubmed: 30342933
Mol Cell. 2006 Oct 20;24(2):279-91
pubmed: 17052461
Cell Rep. 2018 Oct 30;25(5):1135-1145.e5
pubmed: 30380406
Nature. 2014 Feb 6;506(7486):111-5
pubmed: 24362567
Chembiochem. 2016 Oct 17;17(20):1968-1977
pubmed: 27504600
Nucleic Acids Res. 2006 Mar 31;34(6):1772-84
pubmed: 16582103
J Biol Chem. 2019 Aug 30;294(35):13061-13072
pubmed: 31300556
Nucleic Acids Res. 2013 Mar 1;41(5):3130-43
pubmed: 23355612
J Biol Chem. 2015 May 15;290(20):12514-22
pubmed: 25814667
Bioessays. 1997 Oct;19(10):893-901
pubmed: 9363683
Proc Natl Acad Sci U S A. 2002 Dec 24;99(26):16654-9
pubmed: 12475934
Astrobiology. 2023 Jan 9;:
pubmed: 36622808
Nat Chem Biol. 2010 Oct;6(10):774-81
pubmed: 20729855
Nat Rev Mol Cell Biol. 2016 Jun;17(6):350-63
pubmed: 27093943
Nat Protoc. 2015 Sep;10(9):1433-44
pubmed: 26313479
Proc Natl Acad Sci U S A. 2013 Aug 6;110(32):12942-7
pubmed: 23882084
Nat Struct Mol Biol. 2011 Dec 04;19(1):98-104
pubmed: 22139012
J Biol Chem. 2015 Oct 23;290(43):26259-69
pubmed: 26338705
Nat Protoc. 2008;3(6):1101-8
pubmed: 18546601
J Biol Chem. 1992 Apr 25;267(12):8117-22
pubmed: 1569068
Genes Genet Syst. 2010;85(4):243-57
pubmed: 21178304
Nucleic Acids Res. 2017 Nov 2;45(19):11193-11212
pubmed: 28977421
J Bacteriol. 2019 Mar 13;201(7):
pubmed: 30670546
J Exp Med. 2012 Jul 30;209(8):1419-26
pubmed: 22802351
J Biol Chem. 2002 Apr 26;277(17):14379-89
pubmed: 11825897
Nucleic Acids Res. 2004 May 06;32(8):2520-8
pubmed: 15131255
J Biol Chem. 1995 Mar 3;270(9):4503-8
pubmed: 7876218
J Biol Chem. 2017 May 26;292(21):8835-8845
pubmed: 28373277
FEMS Microbiol Lett. 2000 May 1;186(1):127-32
pubmed: 10779724
J Biol Chem. 2017 Mar 24;292(12):4777-4788
pubmed: 28159842
Int J Mol Sci. 2021 May 14;22(10):
pubmed: 34068992
Nat Commun. 2021 Aug 20;12(1):5055
pubmed: 34417448
Proc Natl Acad Sci U S A. 2010 Mar 16;107(11):4949-54
pubmed: 20194773
J Biol Chem. 2004 Jun 4;279(23):24394-402
pubmed: 15037610
J Bacteriol. 2017 Jun 13;199(13):
pubmed: 28416706
Gastroenterology. 2019 Jan;156(1):145-159.e19
pubmed: 30273559
DNA Repair (Amst). 2020 Feb;86:102767
pubmed: 31841800
Extremophiles. 2014 Mar;18(2):415-27
pubmed: 24509689
Science. 2011 Jun 24;332(6037):1561-4
pubmed: 21700875
Biomolecules. 2020 Jul 14;10(7):
pubmed: 32674430
Elife. 2019 Jun 11;8:
pubmed: 31184586
Mol Cell. 2012 Sep 28;47(6):980-6
pubmed: 22864116
ISME J. 2009 Jul;3(7):873-6
pubmed: 19295639
DNA Repair (Amst). 2017 Aug;56:26-32
pubmed: 28629774
J Mol Biol. 2003 Apr 18;328(1):73-84
pubmed: 12683998
Mol Microbiol. 2008 Nov;70(3):746-61
pubmed: 18826407
Nature. 2022 Feb;602(7898):623-631
pubmed: 35140396
EMBO Rep. 2006 Jan;7(1):59-65
pubmed: 16299470
Biochem Biophys Res Commun. 2003 Sep 12;309(1):247-52
pubmed: 12943689
J Biol Chem. 2008 Mar 28;283(13):8331-9
pubmed: 18203718
DNA Repair (Amst). 2002 Nov 3;1(11):895-912
pubmed: 12531018
J Clin Invest. 2015 Jan;125(1):413-24
pubmed: 25500883
Cell. 2012 May 25;149(5):1008-22
pubmed: 22579044
J Mol Biol. 2012 Oct 26;423(3):315-36
pubmed: 22902479
Nat Genet. 2006 Aug;38(8):910-6
pubmed: 16845400
Front Microbiol. 2015 Sep 15;6:983
pubmed: 26441913
EMBO J. 2015 May 5;34(9):1259-69
pubmed: 25777529
Nucleic Acids Res. 2014;42(17):11056-70
pubmed: 25200080
J Mol Biol. 2002 Nov 8;323(5):795-810
pubmed: 12417194
PLoS Genet. 2013 Nov;9(11):e1003878
pubmed: 24244177
Microbes Environ. 2019 Sep 25;34(3):316-326
pubmed: 31353332
Genes Dev. 2004 Apr 1;18(7):794-804
pubmed: 15059961
J Mol Cell Biol. 2011 Feb;3(1):23-30
pubmed: 21278448
Mutat Res. 1992 Sep;275(3-6):355-66
pubmed: 1383776
Hum Mol Genet. 2015 Feb 1;24(3):649-58
pubmed: 25274781
Appl Environ Microbiol. 2014 Apr;80(7):2299-306
pubmed: 24487541
Nucleic Acids Res. 2020 May 7;48(8):4274-4297
pubmed: 32187369