Genome Report: Chromosome-level genome of the transformable northern wattle, Acacia crassicarpa.

Acacia crassicarpa Acra3RX Caesalpinioideae northern wattle transformation unifacial morphogenesis whole genome duplication

Journal

G3 (Bethesda, Md.)
ISSN: 2160-1836
Titre abrégé: G3 (Bethesda)
Pays: England
ID NLM: 101566598

Informations de publication

Date de publication:
14 Dec 2023
Historique:
received: 13 09 2023
revised: 21 11 2023
accepted: 01 12 2023
medline: 14 12 2023
pubmed: 14 12 2023
entrez: 14 12 2023
Statut: aheadofprint

Résumé

The genus Acacia is a large group of woody legumes containing an enormous amount of morphological diversity in leaf shape. This diversity is at least in part the result of an innovation in leaf development where many Acacia species are capable of developing leaves of both bifacial and unifacial morphology. While not unique in the plant kingdom, unifaciality is most commonly associated with monocots, and its developmental genetic mechanisms have yet to be explored beyond this group. Here we identify an accession of Acacia crassicarpa with high regeneration rates, and isolate a clone for genome sequencing. We generate a chromosome level assembly of this readily transformable clone and using comparative analyses confirm a whole genome duplication unique to Caesalpinoid legumes. This resource will be important for future work examining genome evolution in legumes and the unique developmental genetic mechanisms underlying unifacial morphogenesis in Acacia.

Identifiants

pubmed: 38096217
pii: 7473315
doi: 10.1093/g3journal/jkad284
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Published by Oxford University Press on behalf of The Genetics Society of America 2023.

Auteurs

Isabelle Massaro (I)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA 94720, USA.

R Scott Poethig (RS)

Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA.

Neelima R Sinha (NR)

Department of Plant Biology, University of California Davis, Davis, CA 95616, USA.

Aaron R Leichty (AR)

Department of Plant and Microbial Biology, University of California Berkeley, Berkeley, CA 94720, USA.
Department of Plant Biology, University of California Davis, Davis, CA 95616, USA.
USDA Plant Gene Expression Center, 800 Buchanan Street, Albany, CA 94710, USA.

Classifications MeSH