The

AIDS GWAS HIV-1 MHC elite controllers genetics haplotype viral load

Journal

Frontiers in immunology
ISSN: 1664-3224
Titre abrégé: Front Immunol
Pays: Switzerland
ID NLM: 101560960

Informations de publication

Date de publication:
2023
Historique:
received: 02 10 2023
accepted: 10 11 2023
medline: 26 12 2023
pubmed: 26 12 2023
entrez: 26 12 2023
Statut: epublish

Résumé

We have reanalyzed the genomic data of the International Collaboration for the Genomics of HIV (ICGH), centering on HIV-1 Elite Controllers. We performed a genome-wide Association Study comparing 543 HIV Elite Controllers with 3,272 uninfected controls of European descent. Using the latest database for imputation, we analyzed 35,552 Single Nucleotide Polymorphisms (SNPs) within the Major Histocompatibility Complex ( Our analysis identified 2,626 SNPs significantly associated (p<5. 10-8) with elite control of HIV-1 infection, including well-established These findings suggest that additional molecular mechanisms beyond the conventional antigen-presenting role of class I HLA molecules may contribute to the observed influence of

Identifiants

pubmed: 38146367
doi: 10.3389/fimmu.2023.1305856
pmc: PMC10749428
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1305856

Informations de copyright

Copyright © 2023 Rahmouni, De Marco, Spadoni, Tison, Medina-Santos, Labib, Noirel, Tamouza, Limou, Delaneau, Fellay, Bensussan, Le Clerc, McLaren and Zagury.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest. The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision.

Auteurs

Myriam Rahmouni (M)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Lorenzo De Marco (L)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Jean-Louis Spadoni (JL)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Maxime Tison (M)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Raissa Medina-Santos (R)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Taoufik Labib (T)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Josselin Noirel (J)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Ryad Tamouza (R)

Université Paris Est Créteil, INSERM U955, IMRB, Laboratoire Neuro-Psychiatrie translationnelle, Créteil, France.

Sophie Limou (S)

Nantes Université, Ecole Centrale Nantes, INSERM, Center for Research in Transplantation and Translational Immunology (CR2TI), Nantes, France.

Olivier Delaneau (O)

Department of Computational Biology, University of Lausanne, Lausanne, Switzerland.

Jacques Fellay (J)

Global Health Institute, School of Life Sciences, École Polytechnique Fédérale de Lausanne, Lausanne, Switzerland.

Armand Bensussan (A)

Unité INSERM U976, Hôpital Saint-Louis, Paris, France.

Sigrid Le Clerc (S)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Paul J McLaren (PJ)

Sexually Transmitted and Blood-Borne Infections Division at JC Wilt Infectious Diseases Research Centre, National Microbiology Laboratory Branch, Public Health Agency of Canada, Winnipeg, MB, Canada.
Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, MB, Canada.

Jean-François Zagury (JF)

Laboratoire Génomique, Bioinformatique, et Chimie Moléculaire, EA7528, Conservatoire National des Arts et Métiers, HESAM Université, Paris, France.

Classifications MeSH