A Novel Adductomics Workflow Incorporating

Adducts Cross-linking modifications Data-dependent acquisition Exposome High-resolution tandem mass spectrometry Nucleic acid adductomics Software

Journal

Environmental science & technology
ISSN: 1520-5851
Titre abrégé: Environ Sci Technol
Pays: United States
ID NLM: 0213155

Informations de publication

Date de publication:
28 Dec 2023
Historique:
medline: 28 12 2023
pubmed: 28 12 2023
entrez: 28 12 2023
Statut: aheadofprint

Résumé

Exposure to the physicochemical agents that interact with nucleic acids (NA) may lead to modification of DNA and RNA (i.e., NA modifications), which have been associated with various diseases, including cancer. The emerging field of NA adductomics aims to identify both known and unknown NA modifications, some of which may also be associated with proteins. One of the main challenges for adductomics is the processing of massive and complex data generated by high-resolution tandem mass spectrometry (HR-MS/MS). To address this, we have developed a software called "

Identifiants

pubmed: 38153287
doi: 10.1021/acs.est.3c04674
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Chiung-Wen Hu (CW)

Department of Public Health, Chung Shan Medical University, Taichung 402, Taiwan.

Yuan-Jhe Chang (YJ)

Department of Occupational Safety and Health, Chung Shan Medical University, Taichung 402, Taiwan.

Wei-Hung Chang (WH)

Agricultural Biotechnology Research Center, Academia Sinica, Taipei 115, Taiwan.

Marcus S Cooke (MS)

Oxidative Stress Group, Department of Molecular Biosciences, University of South Florida, Tampa, Florida 33620, United States.

Yet-Ran Chen (YR)

Agricultural Biotechnology Research Center, Academia Sinica, Taipei 115, Taiwan.

Mu-Rong Chao (MR)

Department of Occupational Safety and Health, Chung Shan Medical University, Taichung 402, Taiwan.
Department of Occupational Medicine, Chung Shan Medical University Hospital, Taichung 402, Taiwan.

Classifications MeSH