Comprehensive somatic mutational analysis in glioblastoma: Implications for precision medicine approaches.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 27 06 2023
accepted: 27 11 2023
medline: 3 1 2024
pubmed: 3 1 2024
entrez: 2 1 2024
Statut: epublish

Résumé

Glioblastoma multiforme (GBM), a malignant neoplasm originating from glial cells, remains challenging to treat despite the current standard treatment approach that involves maximal safe surgical resection, radiotherapy, and adjuvant temozolomide chemotherapy. This underscores the critical need to identify new molecular targets for improved therapeutic interventions. The current study aimed to explore the somatic mutations and potential therapeutic targets in GBM using somatic mutational information from four distinct GBM datasets including CGGA, TCGA, CPTAC and MAYO-PDX. The analysis included the evaluation of whole exome sequencing (WES) of GBM datasets, tumor mutation burden assessment, survival analysis, drug sensitivity prediction, and examination of domain-specific amino acid changes. The results identified the top ten commonly altered genes in the aforementioned GBM datasets and patients with mutations in OBSCN and AHNAK2 alone or in combination had a more favorable overall survival (OS). Also, the study identified potential drug sensitivity patterns in GBM patients with mutations in OBSCN and AHNAK2, and evaluated the impact of amino acid changes in specific protein domains on the survival of GBM patients. These findings provide important insights into the genetic alterations and somatic interactions in GBM, which could have implications for the development of new therapeutic strategies for this aggressive malignancy.

Identifiants

pubmed: 38166029
doi: 10.1371/journal.pone.0295698
pii: PONE-D-23-20005
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0295698

Informations de copyright

Copyright: © 2024 Azimi et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

Parisa Azimi (P)

Neuroscience Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

Mina Karimpour (M)

Department of Genetics, Faculty of Biological Sciences, Tarbiat Modares University, Tehran, Iran.

Taravat Yazdanian (T)

School of Medicine, Capital Medical University, Beijing, China.

Mehdi Totonchi (M)

Department of Genetics, Reproductive Biomedicine Research Center, Royan Institute, Tehran, Iran.

Abolhassan Ahmadiani (A)

Neuroscience Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

Classifications MeSH