Methods for improving colorectal cancer annotation efficiency for artificial intelligence-observer training.
Artificial intelligence
Colorectal cancer
Detection
Journal
World journal of radiology
ISSN: 1949-8470
Titre abrégé: World J Radiol
Pays: United States
ID NLM: 101538184
Informations de publication
Date de publication:
28 Dec 2023
28 Dec 2023
Historique:
received:
03
10
2023
revised:
13
11
2023
accepted:
05
12
2023
medline:
5
1
2024
pubmed:
5
1
2024
entrez:
5
1
2024
Statut:
ppublish
Résumé
Missing occult cancer lesions accounts for the most diagnostic errors in retrospective radiology reviews as early cancer can be small or subtle, making the lesions difficult to detect. Second-observer is the most effective technique for reducing these events and can be economically implemented with the advent of artificial intelligence (AI). To achieve appropriate AI model training, a large annotated dataset is necessary to train the AI models. Our goal in this research is to compare two methods for decreasing the annotation time to establish ground truth: Skip-slice annotation and AI-initiated annotation. We developed a 2D U-Net as an AI second observer for detecting colorectal cancer (CRC) and an ensemble of 5 differently initiated 2D U-Net for ensemble technique. Each model was trained with 51 cases of annotated CRC computed tomography of the abdomen and pelvis, tested with 7 cases, and validated with 20 cases from The Cancer Imaging Archive cases. The sensitivity, false positives per case, and estimated Dice coefficient were obtained for each method of training. We compared the two methods of annotations and the time reduction associated with the technique. The time differences were tested using Friedman's two-way analysis of variance. Sparse annotation significantly reduces the time for annotation particularly skipping 2 slices at a time ( Our data support the sparse annotation technique as an efficient technique for reducing the time needed to establish the ground truth.
Sections du résumé
BACKGROUND
BACKGROUND
Missing occult cancer lesions accounts for the most diagnostic errors in retrospective radiology reviews as early cancer can be small or subtle, making the lesions difficult to detect. Second-observer is the most effective technique for reducing these events and can be economically implemented with the advent of artificial intelligence (AI).
AIM
OBJECTIVE
To achieve appropriate AI model training, a large annotated dataset is necessary to train the AI models. Our goal in this research is to compare two methods for decreasing the annotation time to establish ground truth: Skip-slice annotation and AI-initiated annotation.
METHODS
METHODS
We developed a 2D U-Net as an AI second observer for detecting colorectal cancer (CRC) and an ensemble of 5 differently initiated 2D U-Net for ensemble technique. Each model was trained with 51 cases of annotated CRC computed tomography of the abdomen and pelvis, tested with 7 cases, and validated with 20 cases from The Cancer Imaging Archive cases. The sensitivity, false positives per case, and estimated Dice coefficient were obtained for each method of training. We compared the two methods of annotations and the time reduction associated with the technique. The time differences were tested using Friedman's two-way analysis of variance.
RESULTS
RESULTS
Sparse annotation significantly reduces the time for annotation particularly skipping 2 slices at a time (
CONCLUSION
CONCLUSIONS
Our data support the sparse annotation technique as an efficient technique for reducing the time needed to establish the ground truth.
Identifiants
pubmed: 38179201
doi: 10.4329/wjr.v15.i12.359
pmc: PMC10762523
doi:
Types de publication
Journal Article
Langues
eng
Pagination
359-369Informations de copyright
©The Author(s) 2023. Published by Baishideng Publishing Group Inc. All rights reserved.
Déclaration de conflit d'intérêts
Conflict-of-interest statement: All the authors report no relevant conflicts of interest for this article.