Metatranscriptomes of two biological soil crust types from the Mojave desert in response to wetting.

RNA biocrust desert soil transcriptome wetting

Journal

Microbiology resource announcements
ISSN: 2576-098X
Titre abrégé: Microbiol Resour Announc
Pays: United States
ID NLM: 101728794

Informations de publication

Date de publication:
08 Jan 2024
Historique:
medline: 8 1 2024
pubmed: 8 1 2024
entrez: 8 1 2024
Statut: aheadofprint

Résumé

We present eight metatranscriptomic datasets of light algal and cyanolichen biological soil crusts from the Mojave Desert in response to wetting. These data will help us understand gene expression patterns in desert biocrust microbial communities after they have been reactivated by the addition of water.

Identifiants

DOI: 10.1128/mra.01080-23 PMID: 38189307
pubmed: 38189307
doi: 10.1128/mra.01080-23
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e0108023

Auteurs

Thuy M Nguyen (TM)

Department of Biology and Center for Biodiversity and Conservation Research, University, University of Mississippi, Mississippi, USA.
ORCID: 0000-0002-0164-5340

Nuttapon Pombubpa (N)

Department of Microbiology and Plant Pathology, University of California, Riverside, California, USA.
ORCID: 0000-0003-3385-5331

Marcel Huntemann (M)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-1284-3748

Alicia Clum (A)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-5004-3362

Brian Foster (B)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Bryce Foster (B)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Simon Roux (S)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-5831-5895

Krishnaveni Palaniappan (K)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Neha Varghese (N)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0003-0580-0675

Supratim Mukherjee (S)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-6322-2271

T B K Reddy (TBK)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-0871-5567

Chris Daum (C)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0003-3895-5892

Alex Copeland (A)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-3971-5439

I-Min A Chen (I-MA)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.

Natalia N Ivanova (NN)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-5802-9485

Nikos C Kyrpides (NC)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-6131-0462

Miranda Harmon-Smith (M)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-3980-1820

Emiley A Eloe-Fadrosh (EA)

US Department of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, California, USA.
ORCID: 0000-0002-8162-1276

Nicole Pietrasiak (N)

School of Life Sciences, University of Nevada-Las Vegas, Las Vegas, Nevada, USA.
ORCID: 0000-0003-4636-8006

Jason E Stajich (JE)

Department of Microbiology and Plant Pathology, University of California, Riverside, California, USA.
ORCID: 0000-0002-7591-0020

Erik F Y Hom (EFY)

Department of Biology and Center for Biodiversity and Conservation Research, University, University of Mississippi, Mississippi, USA.
ORCID: 0000-0003-0964-0031

Classifications MeSH