Expression of virus-like particles (VLPs) of foot-and-mouth disease virus (FMDV) using Saccharomyces cerevisiae.

Capsid protein FMDV Ribosomal skipping Saccharomyces cerevisiae Virus-like particle

Journal

Applied microbiology and biotechnology
ISSN: 1432-0614
Titre abrégé: Appl Microbiol Biotechnol
Pays: Germany
ID NLM: 8406612

Informations de publication

Date de publication:
Dec 2024
Historique:
received: 04 07 2023
accepted: 30 09 2023
revised: 19 09 2023
medline: 9 1 2024
pubmed: 9 1 2024
entrez: 9 1 2024
Statut: ppublish

Résumé

We engineered Saccharomyces cerevisiae to express structural proteins of foot-and-mouth disease virus (FMDV) and produce virus-like particles (VLPs). The gene, which encodes four structural capsid proteins (VP0 (VP4 and VP2), VP3, and VP1), followed by a translational "ribosomal skipping" sequence consisting of 2A and protease 3C, was codon-optimized and chemically synthesized. The cloned gene was used to transform S. cerevisiae 2805 strain. Western blot analysis revealed that the polyprotein consisting of VP0, VP3, and VP1 was processed into the discrete capsid proteins. Western blot analysis of 3C confirmed the presence of discrete 3C protein, suggesting that the 2A sequence functioned as a "ribosomal skipping" signal in the yeast for an internal re-initiation of 3C translation from a monocistronic transcript, thereby indicating polyprotein processing by the discrete 3C protease. Moreover, a band corresponding to only VP2, which was known to be non-enzymatically processed from VP0 to both VP4 and VP2 during viral assembly, further validated the assembly of processed capsid proteins into VLPs. Electron microscopy showed the presence of the characteristic icosahedral VLPs. Our results clearly demonstrate that S. cerevisiae processes the viral structural polyprotein using a viral 3C protease and the resulting viral capsid subunits are assembled into virion particles. KEY POINTS: • Ribosomal skipping by self-cleaving FMDV peptide in S. cerevisiae. • Proteolytic processing of a structural polyprotein from a monocistronic transcript. • Assembly of the processed viral capsid proteins into a virus-like particle.

Identifiants

pubmed: 38194136
doi: 10.1007/s00253-023-12902-9
pii: 10.1007/s00253-023-12902-9
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1-10

Subventions

Organisme : National Research Foundation of Korea
ID : 2017R1A6A1A03015876
Organisme : National Research Foundation of Korea
ID : 2022R1A6A3A01087013

Informations de copyright

© 2024. The Author(s).

Références

Atkins JF, Wills NM, Loughran G, Wu CY, Parsawar K, Ryan MD, Wang CH, Nelson CC (2007) A case for “StopGo”: reprogramming translation to augment codon meaning of GGN by promoting unconventional termination (Stop) after addition of glycine and then allowing continued translation (Go). RNA 13(6):803–810. https://doi.org/10.1261/rna.487907
doi: 10.1261/rna.487907 pubmed: 17456564 pmcid: 1869043
Ausubel FM, Brent R, Kingston RE, Moore DD, Seidman JG, Smith JA, Struhl K (1998) Current protocols in molecular biology. John Wiley and Sons, New York
Bal J, Jung HY, Nguyen NL, Park J, Jang YS, Kim DH (2018a) Evaluation of cell-surface displayed synthetic consensus dengue EDIII cells as a potent oral vaccine candidate. Microb Cell Fact 17(1):146. https://doi.org/10.1186/s12934-018-0994-8
doi: 10.1186/s12934-018-0994-8 pubmed: 30217208 pmcid: 6138890
Bal J, Luong NN, Park J, Song KD, Jang YS, Kim DH (2018b) Comparative immunogenicity of preparations of yeast-derived dengue oral vaccine candidate. Microb Cell Fact 7(1):24. https://doi.org/10.1186/s12934-018-0876-0
doi: 10.1186/s12934-018-0876-0
Belsham GJ, Botner A (2015) Use of recombinant capsid proteins in the development of a vaccine against the foot-and-mouth disease virus. Virus Adapt Treat 7:11–23. https://doi.org/10.2147/VAAT.S55351
doi: 10.2147/VAAT.S55351
Bhat SA, Saravanan P, Hosamani M, Basagoudanavar SH, Sreenivasa BP, Tamilselvan RP, Venkataramanan R (2013) Novel immunogenic baculovirus expressed virus-like particles of foot-and-mouth disease (FMD) virus protect guinea pigs against challenge. Res Vet Sci 95(3):1217–1223. https://doi.org/10.1016/j.rvsc.2013.07.007
doi: 10.1016/j.rvsc.2013.07.007 pubmed: 23969204
Blandin G, Durrens P, Tekaia F, Aigle M, Bolotin-Fukuhara M, Bon E, Casaregola S, de Montigny J, Gaillardin C, Lepingle A, Llorente B, Malpertuy A, Neuveglise C, Ozier-Kalogeropoulos O, Perrin A, Potier S, Souciet J, Talla E, Toffano-Nioche C, Wesolowski-Louvel M, Marck C, Dujon B (2000) Genomic exploration of the hemiascomycetous yeasts: 4. The genome of Saccharomyces cerevisiae revisited. FEBS Lett 487(1):31–36. https://doi.org/10.1016/S0014-5793(00)02275-4
Brachat S, Dietrich FS, Voegeli S, Zhang Z, Stuart L, Lerch A, Gates K, Gaffney T, Philippsen P (2003) Reinvestigation of the Saccharomyces cerevisiae genome annotation by comparison to the genome of a related fungus: Ashbya gossypii. Genome Biol 4(7):R45. https://doi.org/10.1186/gb-2003-4-7-r45
doi: 10.1186/gb-2003-4-7-r45 pubmed: 12844361 pmcid: 193632
Cao Y, Lu Z, Sun J, Bai X, Sun P, Bao H, Chen Y, Guo J, Li D, Liu X, Liu Z (2009) Synthesis of empty capsid-like particles of Asia I foot-and-mouth disease virus in insect cells and their immunogenicity in guinea pigs. Vet Microbiol 137(1–2):10–17. https://doi.org/10.1016/j.vetmic.2008.12.007
doi: 10.1016/j.vetmic.2008.12.007 pubmed: 19167843
Cen Q, Gao T, Ren Y, Lu X, Lei H (2021) Immune evaluation of a Saccharomyces cerevisiae-based oral vaccine against Helicobacter pylori in mice. Helicobacter 26(1):e12772. https://doi.org/10.1111/hel.12772
doi: 10.1111/hel.12772 pubmed: 33219579
Cliften PF, Hillier LW, Fulton L, Graves T, Miner T, Gish WR, Waterston M, Johnston RH (2001) Surveying Saccharomyces genomes to identify functional elements by comparative DNA sequence analysis. Genome Res 11(7):1175–1186. https://doi.org/10.1101/gr.182901
doi: 10.1101/gr.182901 pubmed: 11435399
de Felipe P, Hughes LE, Ryan MD, Brown JD (2003) Co-translational, intraribosomal cleavage of polypeptides by the foot-and-mouth disease virus 2A peptide. J Biol Chem 278(13):11441–11448. https://doi.org/10.1074/jbc.M211644200
doi: 10.1074/jbc.M211644200 pubmed: 12522142
Doel TR, Baccarini PJ (1981) Thermal stability of foot-and-mouth disease virus. Arch Virol 70(1):21–32. https://doi.org/10.1007/BF01320790
doi: 10.1007/BF01320790 pubmed: 6277281
Domingo E, Escarmis C, Baronowski E, Ruiz-Jarabo CM, Carrillo E, Nunez JI (2003) Evolution of foot-and-mouth disease virus. Virus Res 91(1):47–63. https://doi.org/10.1016/S0168-1702(02)00259-9
doi: 10.1016/S0168-1702(02)00259-9 pubmed: 12527437
Dong H, Guo HC, Sun SQ (2014) Virus-like particles in picornavirus vaccine development. Appl Microbiol Biotechnol 98(10):4321–4329. https://doi.org/10.1007/s00253-014-5639-1
doi: 10.1007/s00253-014-5639-1 pubmed: 24647496
Dong H, Lu Y, Zhang Y, Mu S, Wang N, Du P, Zhi X, Wen X, Wang X, Sun S, Zhang Y, Guo H (2021) A heat-induced mutation on VP1 of foot-and-mouth disease virus serotype O enhanced capsid stability and immunogenicity. J Virol 95(16):e0017721. https://doi.org/10.1128/JVI.00177-21
doi: 10.1128/JVI.00177-21 pubmed: 34011545
Donnelly ML, Hughes LE, Luke G, Mendoza H, Ten Dam E, Gani D (2001) The ‘cleavage’ activities of foot-and-mouth disease virus 2A site-directed mutants and naturally occurring ‘2A-like’ sequences. J Gen Virol 82(Pt 5):1027–1041. https://doi.org/10.1099/0022-1317-82-5-1027
doi: 10.1099/0022-1317-82-5-1027 pubmed: 11297677
Dunham MJ, Badrane H, Ferea T, Adams J, Brown PO, Rosenzweig D, Botstein F (2002) Characteristic genome rearrangements in experimental evolution of Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 99(25):16144–16149. https://doi.org/10.1073/pnas.242624799
doi: 10.1073/pnas.242624799 pubmed: 12446845 pmcid: 138579
Fenner FJ, Gibbs PJ, Murphy FA, Rott R, Studdert MJ, White DO (1993) Veterinary virology. Academic Press, New York
Fry EE, Lea SM, Jackson T, Newman JW, Ellard FM, Blakemore WE, Abu-Ghazaleh R, Samuel A, King AM, Stuart DI (1999) The structure and function of a foot-and-mouth disease virus-oligosaccharide receptor complex. EMBO J 18(3):543–554. https://doi.org/10.1093/emboj/18.3.543
doi: 10.1093/emboj/18.3.543 pubmed: 9927414 pmcid: 1171147
Gao T, Ren Y, Li S, Lu X, Lei H (2021) Immune response induced by oral administration with a Saccharomyces cerevisiae-based SARS-CoV-2 vaccine in mice. Microb Cell Fact 20(1):95. https://doi.org/10.1186/s12934-021-01584-5
doi: 10.1186/s12934-021-01584-5 pubmed: 33952256 pmcid: 8097247
Garfinkel DJ (2005) Genome evolution mediated by Ty elements in Saccharomyces. Cytogenet Genome Res 110(1–4):63–69. https://doi.org/10.1159/000084939
doi: 10.1159/000084939 pubmed: 16093659
Gietz D, St Jean A, Woods RA, Schiestl RH (1992) Improved method for high efficiency transformation of intact yeast cells. Nucleic Acids Res 20(6):1425. https://doi.org/10.1093/nar/20.6.1425
doi: 10.1093/nar/20.6.1425 pubmed: 1561104 pmcid: 312198
Goffeau A, Barrell BG, Bussey H, Davis RW, Dujon B, Feldmann H, Galibert F, Hoheisel JD, Jacq C, Jonston NM, Louis EJ, Mewes HW, Murakami Y, Philippsen P, Tettelin H, Oliver SG (1996) Life with 6000 genes. Science 274(5287):546–567. https://doi.org/10.1126/science.274.5287.546
doi: 10.1126/science.274.5287.546 pubmed: 8849441
Goffeau A, Park J, Paulsen IT, Jonniaux JL, Dinh T, Mordant P, Saier MH Jr (1997) Multidrug-resistant transport proteins in yeast: complete inventory and phylogenetic characterization of yeast open reading frames with the major facilitator superfamily. Yeast 13(1):43–54. https://doi.org/10.1002/(SICI)1097-0061(199701)13:1%3C43::AID-YEA56%3E3.0.CO;2-J
doi: 10.1002/(SICI)1097-0061(199701)13:1%3C43::AID-YEA56%3E3.0.CO;2-J pubmed: 9046086
Goh S, Kolakowski J, Holder A, Pfuhl M, Ngugi D, Ballingall K, Tombacz K, Werling D (2021) Development of a potential yeast-based vaccine platform for Theileria parva infection in cattle. Front Immunol 12:674484. https://doi.org/10.3389/fimmu.2021.674484
doi: 10.3389/fimmu.2021.674484 pubmed: 34305904 pmcid: 8297500
Grubman MJ, Morgan DO, Kendall J, Baxt B (1985) Capsid intermediates assembled in a foot-and-mouth disease virus genome RNA-programmed cell-free translation system and in infected cells. J Virol 56:120–126. https://doi.org/10.1128/jvi.56.1.120-126.1985
doi: 10.1128/jvi.56.1.120-126.1985 pubmed: 2411948 pmcid: 252492
Jamal SM, Belsham GJ (2013) Foot-and-mouth disease: past, present and future. Vet Res 44(1):116. https://doi.org/10.1186/1297-9716-44-116
doi: 10.1186/1297-9716-44-116 pubmed: 24308718 pmcid: 4028749
Kim JM, Jung DI, Eom YJ, Park SM, Yoo HS, Jang YS, Yang MS, Kim DH (2010) Surface-displayed expression of a neutralizing epitope of ApxIIA exotoxin in Saccharomyces cerevisiae and oral administration of it for protective immune responses against challenge by Actinobacillus pleuropneumoniae. Biosci Biotechnol Biochem 74(7):1362–1367. https://doi.org/10.1271/bbb.90941
doi: 10.1271/bbb.90941 pubmed: 20622458
Kim JM, Park SM, Kim JA, Park JA, Yi MH, Kim NS, Bae JL, Park SG, Jang YS, Yang MS, Kim DH (2011) Functional pentameric formation via coexpression of the Escherichia coli heat-labile enterotoxin B subunit and its fusion protein subunit with a neutralizing epitope of ApxIIA exotoxin improves the mucosal immunogenicity and protection against challenge by Actinobacillus pleuropneumoniae. Clin Vaccine Immunol 18(12):2168–2177. https://doi.org/10.1128/CVI.05230-11
doi: 10.1128/CVI.05230-11 pubmed: 22030372 pmcid: 3232707
Kjær J, Belsham GJ (2018) Modifications to the foot-and-mouth disease virus 2A peptide: Influence on polyprotein processing and virus replication. J Virol 92(8):e02218-e2317. https://doi.org/10.1128/JVI.02218-17
doi: 10.1128/JVI.02218-17 pubmed: 29386286 pmcid: 5874415
Kumar M, Saravanan P, Jalali SK (2016) Expression and purification of virus like particles (VLPs) of foot-and-mouth disease virus in Eri silkworm (Samia cynthia ricini) larvae. Virus Dis 27(1):84–90. https://doi.org/10.1007/s13337-015-0290-8
doi: 10.1007/s13337-015-0290-8
Kushnir N, Streatfield SJ, Yusibov V (2012) Virus-like particles as a highly efficient vaccine platform: diversity of targets and production systems and advances in clinical development. Vaccine 31(1):58–83. https://doi.org/10.1016/j.vaccine.2012.10.083
doi: 10.1016/j.vaccine.2012.10.083 pubmed: 23142589 pmcid: 7115575
Li Z, Yi Y, Yin X, Zhang Z, Liu J (2008) Expression of foot-and-mouth disease virus capsid proteins in silkworm-baculovirus expression system and its utilization as a subunit vaccine. PLoS One 3(5):e2273. https://doi.org/10.1371/journal.pone.0002273
doi: 10.1371/journal.pone.0002273 pubmed: 18509464 pmcid: 2386233
Lim YY, Park SM, Jang YS, Yang MS, Kim DH (2003) Production of functional mouse interferon gamma from recombinant Saccharomyces cerevisiasiae. J Microbiol Biotechnol 13(4):537–543
Mo AY, Park SM, Kim YS, Yang MS, Kim DH (2005) Expression of fungal phytase on the cell surface of Saccharomyces cerevisiae. Biotechnol Bioprocess Eng 10(6):576–581. https://doi.org/10.1007/BF02932297
doi: 10.1007/BF02932297
Nguyen NL, Kim JM, Park JA, Park SM, Jang YS, Yang MS, Kim DH (2013) Expression and purification of an immunogenic dengue virus epitope using a synthetic consensus sequence of envelope domain III and Saccharomyces cerevisiae. Protein Expr Purif 88(2):235–242. https://doi.org/10.1016/j.pep.2013.01.009
doi: 10.1016/j.pep.2013.01.009 pubmed: 23376461
Nguyen NL, So KK, Kim JM, Kim SH, Jang YS, Yang MS, Kim DH (2015) Expression and characterization of an M cell-specific ligand-fused dengue virus tetravalent epitope using Saccharomyces cerevisiae. J Biosci Bioeng 119(1):19–27. https://doi.org/10.1016/j.jbiosc.2014.06.005
doi: 10.1016/j.jbiosc.2014.06.005 pubmed: 25027708
Robinson L, Knight-Jones TJ, Charleston B, Rodriguez LL, Gay CG, Sumption KJ, Vosloo W (2016) Global foot-and-mouth disease research update and gap analysis: 7 - pathogenesis and molecular biology. Transbound Emerg Dis 63(Suppl. 1):63–71. https://doi.org/10.1111/tbed.12520
doi: 10.1111/tbed.12520 pubmed: 27320168
Rodriguez LL, Grubman MJ (2009) Foot and mouth disease virus vaccines. Vaccine 27(Suppl. 4):D90–D94. https://doi.org/10.1016/j.vaccine.2009.08.039
doi: 10.1016/j.vaccine.2009.08.039 pubmed: 19837296
Romanosa MA, Scorer CA, Clare JJ (1992) Foreign gene expression in yeast: a review. Yeast 8(6):423–488. https://doi.org/10.1002/yea.320080602
doi: 10.1002/yea.320080602
Seif M, Philippi A, Breinig F, Kiemer AK, Hoppstädter J (2016) Yeast (Saccharomyces cerevisiae) polarizes both M-CSF- and GM-CSF-differentiated macrophages toward an M1-like phenotype. Inflammation 39(5):1690–1703. https://doi.org/10.1007/s10753-016-0404-5
doi: 10.1007/s10753-016-0404-5 pubmed: 27422006
Sharma GK, Mohapatra JK, Pandey LK, Mahajan S, Mathapati BS, Sanyal A, Pattnaik B (2012) Immunodiagnosis of foot-and-mouth disease using mutated recombinant 3ABC polyprotein in a competitive ELISA. J Virol Methods 185(1):52–60. https://doi.org/10.1016/j.jviromet.2012.05.029
doi: 10.1016/j.jviromet.2012.05.029 pubmed: 22683829
Shin YM, Kwon TH, Kim KS, Chae KS, Kim DH, Kim JH, Yang MS (2001) Enhanced iron uptake of Saccharomyces cerevisiae by heterologous expression of a tadpole ferritin gene. Appl Environ Microbiol 67(3):1280–1283. https://doi.org/10.1128/AEM.67.3.1280-1283.2001
doi: 10.1128/AEM.67.3.1280-1283.2001 pubmed: 11229922 pmcid: 92725
So KK, Chun J, Luong NN, Seo HW, Kim DH (2021) Expression of an immunocomplex consisting of Fc fragment fused with a consensus dengue envelope domain III in Saccharomyces cerevisiae. Biotechnol Lett 43(9):1895–1904. https://doi.org/10.1007/s10529-021-03161-7
doi: 10.1007/s10529-021-03161-7 pubmed: 34245387 pmcid: 8272446
Subramanian BM, Madhanmohan M, Sriraman R, Chandrasekhar Reddy RV, Yuvaraj S, Manikumar K (2012) Development of foot-and-mouth disease virus (FMDV) serotype O virus-like-particles (VLPs) vaccine and evaluation of its potency. Antiviral Res 96(3):288–295. https://doi.org/10.1016/j.antiviral.2012.09.019
doi: 10.1016/j.antiviral.2012.09.019
Veerapen VP, van Zyl AR, Wigdorovitz A, Rybicki EP, Meyers AE (2018) Novel expression of immunogenic foot-and-mouth disease virus-like particles in Nicotiana benthamiana. Virus Res 244:213–217. https://doi.org/10.1016/j.virusres.2017.11.027
doi: 10.1016/j.virusres.2017.11.027 pubmed: 29196195
Waegeman H, Soetaert W (2011) Increasing recombinant protein production in Escherichia coli through metabolic and genetic engineering. J Ind Microbiol Biotechnol 38(12):1891–1910. https://doi.org/10.1007/s10295-011-1034-4
doi: 10.1007/s10295-011-1034-4 pubmed: 21901404

Auteurs

Ngoc My Tieu Le (NMT)

Department of Bioactive Material Sciences, Jeonbuk National University, Jeonju, 54896, Jeollabuk-do, Republic of Korea.

Kum-Kang So (KK)

Institute for Molecular Biology and Genetics, Department of Molecular Biology, Jeonbuk National University, Jeonju, Jeollabuk-Do, Republic of Korea.

Jeesun Chun (J)

Institute for Molecular Biology and Genetics, Department of Molecular Biology, Jeonbuk National University, Jeonju, Jeollabuk-Do, Republic of Korea.

Dae-Hyuk Kim (DH)

Department of Bioactive Material Sciences, Jeonbuk National University, Jeonju, 54896, Jeollabuk-do, Republic of Korea. dhkim@jbnu.ac.kr.
Institute for Molecular Biology and Genetics, Department of Molecular Biology, Jeonbuk National University, Jeonju, Jeollabuk-Do, Republic of Korea. dhkim@jbnu.ac.kr.

Classifications MeSH