The high-quality genome of Cryptotaenia japonica and comparative genomics analysis reveals anthocyanin biosynthesis in Apiaceae.
Apiaceae
Cryptotaenia japonica
anthocyanins biosynthesis
comparative genomic
genome assembly
Journal
The Plant journal : for cell and molecular biology
ISSN: 1365-313X
Titre abrégé: Plant J
Pays: England
ID NLM: 9207397
Informations de publication
Date de publication:
12 Jan 2024
12 Jan 2024
Historique:
revised:
15
11
2023
received:
03
02
2023
accepted:
27
12
2023
medline:
12
1
2024
pubmed:
12
1
2024
entrez:
12
1
2024
Statut:
aheadofprint
Résumé
Cryptotaenia japonica, a traditional medicinal and edible vegetable crops, is well-known for its attractive flavors and health care functions. As a member of the Apiaceae family, the evolutionary trajectory and biological properties of C. japonica are not clearly understood. Here, we first reported a high-quality genome of C. japonica with a total length of 427 Mb and N50 length 50.76 Mb, was anchored into 10 chromosomes, which confirmed by chromosome (cytogenetic) analysis. Comparative genomic analysis revealed C. japonica exhibited low genetic redundancy, contained a higher percentage of single-cope gene families. The homoeologous blocks, K
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Guizhou Academy of Agricultural Sciences Project
ID : Qiannong Keyuan Support [2021] 05
Organisme : National Natural Science Foundation of China
ID : 32072563
Organisme : Project of Guizhou Provincial Department of Science and Technology "Construction and Utilization of Horticultural Platform of Plant GenBank Creation"
ID : Qiankehe Fuqi [2022] 005
Organisme : China Postdoctoral Science Foundation
ID : 2021M701742
Organisme : Natural Science Foundation of Jiangsu Province
ID : BK20221009
Organisme : Priority Academic Program Development of Jiangsu Higher Education Institutions
ID : PAPD
Informations de copyright
© 2024 Society for Experimental Biology and John Wiley & Sons Ltd.
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