Microbial membrane transport proteins and their biotechnological applications.

Aquaporins Biomimetic materials Formate nitrite channels Membrane transport proteins

Journal

World journal of microbiology & biotechnology
ISSN: 1573-0972
Titre abrégé: World J Microbiol Biotechnol
Pays: Germany
ID NLM: 9012472

Informations de publication

Date de publication:
16 Jan 2024
Historique:
received: 01 12 2023
accepted: 09 01 2024
medline: 16 1 2024
pubmed: 16 1 2024
entrez: 15 1 2024
Statut: epublish

Résumé

Because of the hydrophobic nature of the membrane lipid bilayer, the majority of the hydrophilic solutes require special transportation mechanisms for passing through the cell membrane. Integral membrane transport proteins (MTPs), which belong to the Major Intrinsic Protein Family, facilitate the transport of these solutes across cell membranes. MTPs including aquaporins and carrier proteins are transmembrane proteins spanning across the cell membrane. The easy handling of microorganisms enabled the discovery of a remarkable number of transport proteins specific to different substances. It has been realized that these transporters have very important roles in the survival of microorganisms, their pathogenesis, and antimicrobial resistance. Astonishing features related to the solute specificity of these proteins have led to the acceleration of the research on the discovery of their properties and the development of innovative products in which these unique properties are used or imitated. Studies on microbial MTPs range from the discovery and characterization of a novel transporter protein to the mining and screening of them in a large transporter library for particular functions, from simulations and modeling of specific transporters to the preparation of biomimetic synthetic materials for different purposes such as biosensors or filtration membranes. This review presents recent discoveries on microbial membrane transport proteins and focuses especially on formate nitrite transport proteins and aquaporins, and advances in their biotechnological applications.

Identifiants

pubmed: 38225445
doi: 10.1007/s11274-024-03891-6
pii: 10.1007/s11274-024-03891-6
doi:

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

71

Informations de copyright

© 2024. The Author(s).

Références

Alberts B, Johnson A, Lewis J et al (2002) Molecular Biology of the Cell. 4th edition. New York: Garland Science. Carrier Proteins and Active Membrane Transport. Available from: https://www.ncbi.nlm.nih.gov/books/NBK26896/
Angelakis AN, Valipour M, Choo K-H, Ahmed AT, Baba A, Kumar R, Toor GS, Wang Z (2021) Desalination: from ancient to Present and Future. Water 13(16):2222. https://doi.org/10.3390/w13162222
doi: 10.3390/w13162222
Ansoborlo E, Adam-Guillermin C (2012) Radionuclide transfer processes in the biosphere. Radionucl Behav Nat Environment: Sci Implications Lessons Nuclear Ind 484–513. https://doi.org/10.1533/9780857097194.2.484
Azarafza A, Islam MA, Golpazirsorkheh Y, Irene E, Mohtada S, Milad K, Arsalan FS, Mohammad Y, Tejraj MA, Mashallah R (2023) Aquaporin-based Biomimetic Membranes for Low Energy Water Desalination and separation applications. Adv Funct Mater 33:2213326. https://doi.org/10.1002/adfm.202213326
doi: 10.1002/adfm.202213326
Barboiu M, Le Duc Y, Gilles A, Cazade PA, Michau M, Marie Legrand Y, van der Lee A, Coasne B, Parvizi P, Post J, Fyles T (2014) An artificial primitive mimic of the Gramicidin-A channel. Nat Commun 2014 5(1 5):1–8. https://doi.org/10.1038/ncomms5142
doi: 10.1038/ncomms5142
Becker M, Börngen K, Nomura T, Battle AR, Marin K, Martinac B, Krämer R (2013) Glutamate efflux mediated by Corynebacterium glutamicum MscCG, Escherichia coli MscS, and their derivatives. Biochim et Biophys Acta (BBA) - Biomembr 1828:1230–1240. https://doi.org/10.1016/J.BBAMEM.2013.01.001
doi: 10.1016/J.BBAMEM.2013.01.001
Beyer L, Doberenz C, Falke D, Hunger D, Suppmann B, Sawers RG (2013) Coordination of FocA and pyruvate formate-lyase synthesis in Escherichia coli demonstrates preferential translocation of formate over other mixed-acid fermentation products. J Bacteriol 195:1428–1435. https://doi.org/10.1128/JB.02166-12
doi: 10.1128/JB.02166-12 pubmed: 23335413 pmcid: 3624525
Bill RM, Hedfalk K (2021) Aquaporins – expression, purification and characterization. Biochimica et Biophysica Acta (BBA) -. Biomembranes 1863:183650. https://doi.org/10.1016/J.BBAMEM.2021.183650
doi: 10.1016/J.BBAMEM.2021.183650 pubmed: 34019902
Borgnia MJ, Kozono D, Calamita G, Maloney PC, Agre P (1999) Functional reconstitution and characterization of AqpZ, the E. Coli water channel protein. J Mol Biol 291(5):1169–1179. https://doi.org/10.1006/jmbi.1999.3032
doi: 10.1006/jmbi.1999.3032 pubmed: 10518952
Boudker O, Verdon G (2010) Structural perspectives on secondary active transporters. Trends Pharmacol Sci 31:418–426. https://doi.org/10.1016/J.TIPS.2010.06.004
doi: 10.1016/J.TIPS.2010.06.004 pubmed: 20655602 pmcid: 2933288
Breitinger U, Farag NS, Sticht H, Breitinger HG (2022) Viroporins: structure, function, and their role in the life cycle of SARS-CoV-2. Int J Biochem Cell Biology 145:106185. https://doi.org/10.1016/j.biocel.2022.106185
doi: 10.1016/j.biocel.2022.106185
Broer S, Kramer R (1990) Lysine uptake and exchange in Corynebacterium glutamicum. J Bacteriol 172:7241–7248. https://doi.org/10.1128/JB.172.12.7241-7248.1990
doi: 10.1128/JB.172.12.7241-7248.1990 pubmed: 2123868 pmcid: 210848
Cady SD, Schmidt-Rohr K, Wang J, Soto CS, DeGrado WF, Hong M (2010) Structure of the amantadine binding site of Influenza M2 Proton Channels in lipid bilayers. Nature 463:689. https://doi.org/10.1038/NATURE08722
doi: 10.1038/NATURE08722 pubmed: 20130653 pmcid: 2818718
Calamita G, Bishai WR, Preston GM, Guggino WB, Agre P (1995) Molecular cloning and characterization of AqpZ, a water channel from Escherichia coli. J Biol Chem 270:29063–29066. https://doi.org/10.1074/jbc.270.49.29063
doi: 10.1074/jbc.270.49.29063 pubmed: 7493926
Calamita G, Kempf B, Bonhivers M, Bishai WR, Bremer E, Agre P (1998) Regulation of the Escherichia coli water channel gene aqpZ. Proceedings of the National Academy of Sciences 95(7):3627–3631 https://doi.org/10.1073/pnas.95.7.3627
Çalıcıoğlu NG, Özdemir GÖ, Öztürk A, Yıldız A, Yılmaz H, Ergenekon P, Erbakan M, Erhan E, Özkan M (2018) Use of halophilic aquaporin for preparation of biomimetic thin film composite membrane. J Memb Sci 568:105–112. https://doi.org/10.1016/J.MEMSCI.2018.09.065
doi: 10.1016/J.MEMSCI.2018.09.065
Camilleri-Rumbau MS, Soler-Cabezas JL, Christensen KV, Norddahl B, Mendoza-Roca JA, Vincent-Vela MC (2019) Application of aquaporin-based forward osmosis membranes for processing of digestate liquid fractions. Chem Eng J 371:583–592. https://doi.org/10.1016/J.CEJ.2019.02.029
doi: 10.1016/J.CEJ.2019.02.029
Chang SYS, Dijkman PM, Wiessing SA, Kudryashev M (2023) Determining the structure of the bacterial voltage-gated sodium channel NaChBac embedded in liposomes by cryo electron tomography and subtomogram averaging. Sci Rep 13:11523. https://doi.org/10.1038/s41598-023-38027-7
doi: 10.1038/s41598-023-38027-7 pubmed: 37460541 pmcid: 10352297
Chen X, Cai X, Chen Z, Wu J, Hao G, Luo Q, Liu S, Zhang J, Hu Y, Zhu G, Koester W, White AP, Cai Y, Wang Y (2022) Mosaic evolution of Beta-barrel-porin-encoding genes in Escherichia coli. Appl Environ Microbiol 88(7):e0006022. https://doi.org/10.1128/aem.00060-22
doi: 10.1128/aem.00060-22 pubmed: 35285711
Chen Y, Ren X, Huang M, Li Y (2023) Evaluation of aquaporin based biomimetic forward osmosis membrane in terms of rejection performance for contaminants in greywater and its membrane fouling properties. Chemosphere 333:138983. https://doi.org/10.1016/J.CHEMOSPHERE.2023.138983
doi: 10.1016/J.CHEMOSPHERE.2023.138983 pubmed: 37207899
Chevalier S, Bouffartigues E, Bodilis J, Maillot O, Lesouhaitier O, Feuilloley MGJ, Orange N, Dufour A, Cornelis P (2017) Structure, function and regulation of Pseudomonas aeruginosa porins. FEMS Microbiol Rev 41(5):698–722. https://doi.org/10.1093/FEMSRE/FUX020
doi: 10.1093/FEMSRE/FUX020 pubmed: 28981745
Chugani S, Greenberg EP (2007) The influence of human respiratory epithelia on Pseudomonas aeruginosa gene expression. Microb Pathog 42:29–35. https://doi.org/10.1016/j.micpath.2006.10.004
doi: 10.1016/j.micpath.2006.10.004 pubmed: 17166692
Chuyang T, Changquan QIU, Zhao Y et al (2014) Aquaporin based thin film composite membranes. U S Patent Application No 14/346,276.
Clegg S, Yu F, Griffiths L, Cole JA (2002) The roles of the polytopic membrane proteins NarK, NarU and NirC in Escherichia coli K-12: two nitrate and three nitrite transporters. Mol Microbiol 44:143–155. https://doi.org/10.1046/j.1365-2958.2002.02858.x
doi: 10.1046/j.1365-2958.2002.02858.x pubmed: 11967075
Cuero R, Lilly J, McKay DS (2012) Constructed molecular sensor to enhance metal detection by bacterial ribosomal switch–ion channel protein interaction. J Biotechnol 158:1–7. https://doi.org/10.1016/J.JBIOTEC.2012.01.011
doi: 10.1016/J.JBIOTEC.2012.01.011 pubmed: 22300511
Czyzewski BK, Wang DN (2012) Identification and characterization of a bacterial hydrosulphide ion channel. Nature 483:494–497. https://doi.org/10.1038/nature10881
doi: 10.1038/nature10881 pubmed: 22407320 pmcid: 3711795
Davies JS, Currie MJ, Wright JD, Newton-Vesty MC, North RA, Mace PD, Allison JR, Dobson RCJ (2021) Selective Nutrient Transport in Bacteria: Multicomponent Transporter systems Reign Supreme. Front Mol Biosci 8:699222. https://doi.org/10.3389/fmolb.2021.699222
doi: 10.3389/fmolb.2021.699222 pubmed: 34268334 pmcid: 8276074
Davies H, Bergmann B, Walloch P, Nerlich C, Hansen C, Wittlin S, Spielmann T, Treeck M, Beitz E (2023) The Plasmodium Lactate/H + transporter PfFNT is essential and druggable in vivo. Antimicrob Agents Chemother 67(8):e0035623. https://doi.org/10.1128/aac.00356-23
doi: 10.1128/aac.00356-23 pubmed: 37428074
Dey S, Dorey A, Abraham L, Xing Y, Zhang I, Zhang F, Howorka S, Yan H (2022) A reversibly gated protein-transporting membrane channel made of DNA. Nat Commun 13:2271. https://doi.org/10.1038/s41467-022-28522-2
doi: 10.1038/s41467-022-28522-2 pubmed: 35484117 pmcid: 9051096
Ding X, Matsumoto T, Gena P, Liu C, Pellegrini-Calace M, Zhong S, Sun X, Zhu Y, Katsuhara M, Iwasaki I, Kitagawa Y, Calamita G (2013) Water and CO
doi: 10.1111/boc.201200057 pubmed: 23289515
Donev R. (2022) Advances in Protein Chemistry and Structural Biology: membrane proteins, 1st edn. Elsevier
Dong XY, Yuan X, Wang RJ (2021) Interaction of air cold plasma with Saccharomyces cerevisiae in the multi-scale microenvironment for improved ethanol yield. Bioresour Technol 323:124621. https://doi.org/10.1016/J.BIORTECH.2020.124621
doi: 10.1016/J.BIORTECH.2020.124621 pubmed: 33412497
Dunlop MJ, Dossani ZY, Szmidt HL, Chu HC, Lee TS, Keasling JD, Hadi MZ, Mukhopadhyay A (2011) Engineering microbial biofuel tolerance and export using efflux pumps. Mol Syst Biol 7:487. https://doi.org/10.1038/MSB.2011.21
doi: 10.1038/MSB.2011.21 pubmed: 21556065 pmcid: 3130554
Dutta C, Krishnamurthy P, Su D et al (2023) Nature-inspired synthetic oligourea foldamer channels allow water transport with high salt rejection. Chem 9(8):2237–2254. https://doi.org/10.1016/J.CHEMPR.2023.04.007
doi: 10.1016/J.CHEMPR.2023.04.007
Ebrahimi A, Ergün T, Kaygusuz İzgördü Ö, Darcan C, Avci H, Öztürk B, Güner HR, Ghorbanpoor H, Doğan Güzel F (2023) Revealing the single-channel characteristics of OprD (OccAB1) porins from hospital strains of Acinetobacter baumannii. Eur Biophys J 52:131–143. https://doi.org/10.1007/s00249-023-01651-2
doi: 10.1007/s00249-023-01651-2 pubmed: 37052656
Elimelech M, Phillip WA (2011) The future of seawater desalination: Energy, technology, and the environment. Sci (1979) 333:712–717. https://doi.org/10.1126/science.1200488
doi: 10.1126/science.1200488
Erler H, Ren B, Gupta N, Beitz E (2018) The intracellular parasite Toxoplasma Gondii harbors three druggable FNT-type formate and ʟ-lactate transporters in the plasma membrane. J Biol Chem 293:17622–17630. https://doi.org/10.1074/jbc.RA118.003801
doi: 10.1074/jbc.RA118.003801 pubmed: 30237165 pmcid: 6231131
Farag NS, Breitinger U, Breitinger HG, El Azizi MA (2020) Viroporins and inflammasomes: a key to understand virus-induced inflammation. Int J Biochem Cell Biology 122:105738. https://doi.org/10.1016/j.biocel.2020.105738
doi: 10.1016/j.biocel.2020.105738
Golldack A, Henke B, Bergmann B, Wiechert M, Erler H, Blancke Soares A, Spielmann T, Beitz E (2017) Substrate-analogous inhibitors exert antimalarial action by targeting the Plasmodium lactate transporter PfFNT at nanomolar scale. PLoS Pathog 13(2):e1006172. https://doi.org/10.1371/journal.ppat.1006172
doi: 10.1371/journal.ppat.1006172 pubmed: 28178358 pmcid: 5298233
Gopikrishnan M, George Priya Doss C (2023) Molecular docking and dynamic approach to screen the drug candidate against the Imipenem-resistant CarO porin in Acinetobacter baumannii. Microb Pathog 177:106049. https://doi.org/10.1016/J.MICPATH.2023.106049
doi: 10.1016/J.MICPATH.2023.106049 pubmed: 36858184
Gradinaru V, Thompson KR, Deisseroth K (2008) eNpHR: a Natronomonas halorhodopsin enhanced for optogenetic applications. Brain Cell Bio 36:129–139. https://doi.org/10.1007/s11068-008-9027-6
doi: 10.1007/s11068-008-9027-6
Grzelakowski M, Cherenet MF, Shen Y, xiao, Kumar M (2015) A framework for accurate evaluation of the promise of aquaporin based biomimetic membranes. J Memb Sci 479:223–231. https://doi.org/10.1016/J.MEMSCI.2015.01.023
doi: 10.1016/J.MEMSCI.2015.01.023
Güvensoy-Morkoyun A, Velioǧlu S, Ahunbay MG, Tantekin-Ersolmaz SB (2022) Desalination potential of aquaporin-inspired functionalization of Carbon nanotubes: bridging between Simulation and Experiment. ACS Appl Mater Interfaces 14:28174–28185. https://doi.org/10.1021/acsami.2c03700
doi: 10.1021/acsami.2c03700 pubmed: 35675202 pmcid: 9227712
Hagström Å, Zweifel UL, Sundh J, Osbeck CMG, Bunse C, Sjöstedt J, Müller-Karulis B, Pinhassi J (2021) Composition and seasonality of membrane transporters in Marine Picoplankton. Front Microbiol 12:714732. https://doi.org/10.3389/FMICB.2021.714732/BIBTEX
doi: 10.3389/FMICB.2021.714732/BIBTEX pubmed: 34650527 pmcid: 8507841
Harris NJ, Booth PJ (2012) Folding and stability of membrane transport proteins in vitro. Biochimica et Biophysica Acta (BBA). - Biomembr 1818:1055–1066. https://doi.org/10.1016/J.BBAMEM.2011.11.006
doi: 10.1016/J.BBAMEM.2011.11.006
Hearn EM, Patel DR, Van Den Berg B (2008) Outer-membrane transport of aromatic hydrocarbons as a first step in biodegradation. Proc Natl Acad Sci U S A 105:8601–8606. https://doi.org/10.1073/pnas.0801264105
doi: 10.1073/pnas.0801264105 pubmed: 18559855 pmcid: 2438428
Helmstetter F, Arnold P, Höger B, Petersen LM, Beitz E (2019) Formate-nitrite transporters carrying nonprotonatable amide amino acids instead of a central histidine maintain pH-dependent transport. J Biol Chem 294:623–631. https://doi.org/10.1074/JBC.RA118.006340
doi: 10.1074/JBC.RA118.006340 pubmed: 30455351
Hua F, Wang HQ (2014) Uptake and trans-membrane transport of petroleum hydrocarbons by microorganisms. Biotechnol Biotechnol Equip 28:165–175. https://doi.org/10.1080/13102818.2014.906136
doi: 10.1080/13102818.2014.906136 pubmed: 26740752 pmcid: 4684044
Hunger D, Doberenz C, Sawers RG (2014) Identification of key residues in the formate channel FocA that control import and export of formate. Biol Chem 395:813–825. https://doi.org/10.1515/hsz-2014-0154
doi: 10.1515/hsz-2014-0154 pubmed: 24659605
Ishibashi K, Kondo S, Hara S, Morishita Y (2011) The evolutionary aspects of aquaporin family. Am J Physiol Regul Integr Comp Physiol 300:566–576. https://doi.org/10.1152/ajpregu.90464.2008
doi: 10.1152/ajpregu.90464.2008
Islam MS, Gaston JP, Baker MAB (2021) Fluorescence Approaches for Characterizing Ion Channels in synthetic bilayers. Membranes. 11(11):857. https://doi.org/10.3390/membranes11110857
Liu J, Chen S, Zhao B, Li G, Ma T (2022a) A novel FadL Homolog, AltL, Mediates Transport of Long-Chain Alkanes and fatty acids in Acinetobacter venetianus RAG-1. Appl Environ Microbiol 88(20):e0129422. https://doi.org/10.1128/AEM.01294-22
doi: 10.1128/AEM.01294-22 pubmed: 36169310
Jeon T-J, Fuwad A, Ryu H, Han ED, Lee JH, Malmstadt N, Kim YR, Seo YH, Kim SM (2023) Highly permeable and Shelf-stable aquaporin biomimetic membrane based on an Anodic. https://doi.org/10.21203/RS.3.RS-3317646/V1 . Aluminum Oxide Substrate
Jeong KB, Kim JS, Dhanasekar NN, Lee MK, Chi SW (2022) Application of Nanopore Sensors for Biomolecular Interactions and Drug Discovery. Chem Asian J 17:e202200679. https://doi.org/10.1002/ASIA.202200679
doi: 10.1002/ASIA.202200679 pubmed: 35929410
Ji ZG, Ishizuka T, Yawo H (2013) Channelrhodopsins-their potential in gene therapy for neurological disorders. Neurosci Res 75(1):6–12. https://doi.org/10.1016/j.neures.2012.09.004
doi: 10.1016/j.neures.2012.09.004 pubmed: 23026479
Jirage KB, Hulteen JC, Martin CR (1997) Nanotubule-based molecular-filtration membranes. Science (1979) 278:655–658. https://doi.org/10.1126/science.278.5338.655
Kasianowicz JJ, Brandin E, Branton D, Deamer DW (1996) Characterization of individual polynucleotide molecules using a membrane channel. Proc Natl Acad Sci U S A 93:13770–13773. https://doi.org/10.1073/pnas.93.24.13770
doi: 10.1073/pnas.93.24.13770 pubmed: 8943010 pmcid: 19421
Kaufman Y, Freger V, Kaufman Y, Freger V (2011) Supported biomimetic membranes for pressure-driven water purification. https://doi.org/10.5772/19770 . On Biomimetics
Kell DB, Swainston N, Pir P, Oliver SG (2015) Membrane transporter engineering in industrial biotechnology and whole cell biocatalysis. Trends Biotechnol 33:237–246. https://doi.org/10.1016/J.TIBTECH.2015.02.001
doi: 10.1016/J.TIBTECH.2015.02.001 pubmed: 25746161
Khoury G, Ewart G, Luscombe C, Miller M, Wilkinson J (2010) Antiviral efficacy of the novel compound BIT225 against HIV-1 release from human macrophages. Antimicrob Agents Chemother 54:835–845. https://doi.org/10.1128/AAC.01308-09
doi: 10.1128/AAC.01308-09 pubmed: 19995924
Kilicaslan GC, Gurbanov R, Darcan C (2023) Evaluation of copper-induced biomolecular changes in different porin mutants of Escherichia coli W3110 by infrared spectroscopy. J Biol Phys. https://doi.org/10.1007/S10867-023-09632-4
doi: 10.1007/S10867-023-09632-4 pubmed: 37010721
Koefoed-Johnsen V, Ussing HH (1953) The contributions of Diffusion and Flow to the passage of D2O through living Membranes.: Effect of Neurohypophysenl hormone 011 isolated Anuran skin. Acta Physiol Scand 28:60–76. https://doi.org/10.1111/j.1748-1716.1953.tb00959.x
doi: 10.1111/j.1748-1716.1953.tb00959.x pubmed: 13065150
Kumar M, Grzelakowski M, Zilles J, Clark M, Meier W (2007) Highly permeable polymeric membranes based on the incorporation of the functional water channel protein aquaporin Z. Proc Natl Acad Sci USA 104(52):20719–20724. https://doi.org/10.1073/pnas.0708762104
doi: 10.1073/pnas.0708762104 pubmed: 18077364 pmcid: 2410068
Kumar M, Payne MM, Poust SK, Zilles JL (2011) Polymer-Based Biomimetic Membranes for Desalination. 43–62. https://doi.org/10.1007/978-94-007-2184-5_3
Lamrabet O, Ghigo E, Mège JL, Lepidi H, Nappez C, Raoult D, Drancourt M (2014) MspA-Mycobacterium tuberculosis-transformant with reduced virulence: the unbirthday paradigm. Microb Pathog 76:10–18. https://doi.org/10.1016/J.MICPATH.2014.08.003
doi: 10.1016/J.MICPATH.2014.08.003 pubmed: 25194334
Lemieux MJ (2008) A perspective on the structural studies of inner membrane electrochemical potential-driven transporters. Biochim Biophys Acta 1778:1805–1813. https://doi.org/10.1016/J.BBAMEM.2008.01.009
doi: 10.1016/J.BBAMEM.2008.01.009 pubmed: 18252193
Li X, Wang R, Tang C, Vararattanavech A, Zhao Y, Torres J, Fane T (2012) Colloids and surfaces B: Biointerfaces Preparation of supported lipid membranes for aquaporin Z incorporation. Colloids Surf B Biointerfaces 94:333–340. https://doi.org/10.1016/j.colsurfb.2012.02.013
doi: 10.1016/j.colsurfb.2012.02.013 pubmed: 22386862
Liu Y, Wang K, Wang Y, Wang L, Yan S, Du X, Zhang P, Chen HY, Huang S (2022b) Machine learning assisted simultaneous structural profiling of differently charged proteins in a Mycobacterium smegmatis porin A (MspA) electroosmotic trap. J Am Chem Soc 144:757–768. https://doi.org/10.1021/jacs.1c09259
doi: 10.1021/jacs.1c09259 pubmed: 34994548
Lü W, Du J, Wacker T, Gerbig-Smentek E, Andrade SL, Einsle O (2011) pH-dependent gating in a FocA formate channel. Science (1979) 332:352–354. https://doi.org/10.1126/science.1199098
Lü W, Du J, Schwarzer NJ, Gerbig-Smentek E, Einsle O, Andrade SL (2012) The formate channel FocA exports the products of mixed-acid fermentation. Proc Natl Acad Sci U S A 109:13254–13259. https://doi.org/10.1073/pnas.1204201109
doi: 10.1073/pnas.1204201109 pubmed: 22847446 pmcid: 3421167
Lun J, Xia C, Yuan C, Zhang Y, Zhong M, Huang T, Hu Z (2014) The outer membrane protein, LamB (maltoporin), is a versatile vaccine candidate among the Vibrio species. Vaccine 32:809–815. https://doi.org/10.1016/j.vaccine.2013.12.035
doi: 10.1016/j.vaccine.2013.12.035 pubmed: 24380680
Luo W, Xie M, Song X, Guo W, Ngo HH, Zhou JL, Nghiem LD (2018) Biomimetic aquaporin membranes for osmotic membrane bioreactors: membrane performance and contaminant removal. Bioresour Technol 249:62–68. https://doi.org/10.1016/j.biortech.2017.09.170
doi: 10.1016/j.biortech.2017.09.170 pubmed: 29040861
Mailaender C, Reiling N, Engelhardt H, Bossmann S, Ehlers S, Niederweis M (2004) The MspA porin promotes growth and increases antibiotic susceptibility of both Mycobacterium bovis BCG and Mycobacterium tuberculosis. Microbiol (Reading) 150:853–864. https://doi.org/10.1099/MIC.0.26902-0
doi: 10.1099/MIC.0.26902-0
Marchetti RV, Lehane AM, Shafik SH, Winterberg M, Martin RE, Kirk K (2015) A lactate and formate transporter in the intraerythrocytic malaria parasite, Plasmodium Falciparum. Nat Commun 6:6721. https://doi.org/10.1038/ncomms7721
doi: 10.1038/ncomms7721 pubmed: 25823844
McCusker EC, Bagnéris C, Naylor CE, Cole AR, D’Avanzo N, Nichols CG, Wallace BA (2012) Structure of a bacterial voltage-gated sodium channel pore reveals mechanisms of opening and closing. Nat Commun 3(1 3):1–8. https://doi.org/10.1038/ncomms2077
doi: 10.1038/ncomms2077
Mckinlay JB (2023) Are Bacteria Leaky? Mechanisms of Metabolite Externalization. In Bacterial Cross-Feeding 77:277–297. https://doi.org/10.1146/annurev-micro-032521
doi: 10.1146/annurev-micro-032521
Milenkovic S, Wang J, Acosta-Gutierrez S et al (2023) How the physical properties of bacterial porins match environmental conditions. Phys Chem Chem Phys 25:12712–12722. https://doi.org/10.1039/d3cp00935a
doi: 10.1039/d3cp00935a pubmed: 37098836
Mishra S, Upadhaya K, Mishra KB, Shukla AK, Tripathi RP, Tiwari VK (2016) Carbohydrate-based therapeutics: a Frontier in Drug Discovery and Development. Stud Nat Prod Chem 49:307–361. https://doi.org/10.1016/B978-0-444-63601-0.00010-7
doi: 10.1016/B978-0-444-63601-0.00010-7
Mukherjee A, Wu D, Davis HC, Shapiro MG (2016) Non-invasive imaging using reporter genes altering cellular water permeability. Nat Commun 7:1–9. https://doi.org/10.1038/ncomms13891
doi: 10.1038/ncomms13891
Mukherjee M, Gupta A, Sankararamakrishnan R (2020) Is the E. Coli Homolog of the Formate/Nitrite Transporter Family an Anion Channel? A computational study. Biophys J 118:846–860. https://doi.org/10.1016/J.BPJ.2019.12.024
doi: 10.1016/J.BPJ.2019.12.024 pubmed: 31968229
Mutanda I, Sun J, Jiang J, Zhu D (2022) Bacterial membrane transporter systems for aromatic compounds: regulation, engineering, and biotechnological applications. Biotechnol Adv 59:107952. https://doi.org/10.1016/J.BIOTECHADV.2022.107952
doi: 10.1016/J.BIOTECHADV.2022.107952 pubmed: 35398204
Nakae T (1976) Identification of the outer membrane protein of E.coli that produces transmembrane channels in reconstituted vesicle membranes. Biochem Biophys Res Commun 71:877–884. https://doi.org/10.1016/0006-291X(76)90913-X
doi: 10.1016/0006-291X(76)90913-X pubmed: 786294
Nguyen HX, Wu T, Needs D, Zhang H, Perelli RM, DeLuca S, Yang R, Pan M, Landstrom AP, Henriquez C, Bursac N (2022) Engineered bacterial voltage-gated sodium channel platform for cardiac gene therapy. Nat Commun 2022 13(1):1–17. https://doi.org/10.1038/s41467-022-28251-6
doi: 10.1038/s41467-022-28251-6
Nieto-Torres JL, Verdiá-Báguena C, Castaño-Rodriguez C, Aguilella VM, Enjuanes L (2015) Relevance of viroporin ion channel activity on viral replication and pathogenesis. Viruses 7:3552–3573. https://doi.org/10.3390/v7072786
doi: 10.3390/v7072786 pubmed: 26151305 pmcid: 4517115
Nieva JL, Madan V, Carrasco L (2012) Viroporins: structure and biological functions. Nat Rev Microbiol 10:563–574. https://doi.org/10.1038/nrmicro2820
doi: 10.1038/nrmicro2820 pubmed: 22751485 pmcid: 7097105
Nikaido H (1992) Porins and specific channels of bacterial outer membranes. Mol Microbiol 6:435–442. https://doi.org/10.1111/j.1365-2958.1992.tb01487.x
doi: 10.1111/j.1365-2958.1992.tb01487.x pubmed: 1373213
Nikaido H, Rosenberg EY (1981) Effect on solute size on diffusion rates through the transmembrane pores of the outer membrane of Escherichia coli. J Gen Physiol 77:121–135. https://doi.org/10.1085/JGP.77.2.121
doi: 10.1085/JGP.77.2.121 pubmed: 7021759
Nikaido H, Saier MH (1992) Transport proteins in bacteria: common themes in their design. Science 258:936–942. https://doi.org/10.1126/SCIENCE.1279804
doi: 10.1126/SCIENCE.1279804 pubmed: 1279804
Nikbakht Fini M, Madsen HT, Sørensen JL, Muff J (2020) Moving from lab to pilot scale in forward osmosis for pesticides rejection using aquaporin membranes. Sep Purif Technol 240:116616. https://doi.org/10.1016/j.seppur.2020.116616
doi: 10.1016/j.seppur.2020.116616
Nygaard R, Kim J, Mancia F (2020) Cryo-electron microscopy analysis of small membrane proteins. Curr Opin Struct Biol 64:26–33. https://doi.org/10.1016/j.sbi.2020.05.009
doi: 10.1016/j.sbi.2020.05.009 pubmed: 32603877 pmcid: 7665978
Oh SY, Cornell B, Smith D, Higgins G, Burrell CJ, Kok TW (2008) Rapid detection of influenza a virus in clinical samples using an ion channel switch biosensor. Biosens Bioelectron 23:1161–1165. https://doi.org/10.1016/J.BIOS.2007.10.011
doi: 10.1016/J.BIOS.2007.10.011 pubmed: 18054481
Onyeabor M, Martinez R, Kurgan G, Wang X (2020) Engineering transport systems for microbial production. Adv Appl Microbiol 111:33–87. https://doi.org/10.1016/BS.AAMBS.2020.01.002
doi: 10.1016/BS.AAMBS.2020.01.002 pubmed: 32446412
Park JS, Choi HY, Kim WG (2020) The nitrite transporter facilitates biofilm formation via suppression of nitrite reductase and is a new antibiofilm target in Pseudomonas aeruginosa. mBio 11:1–18. https://doi.org/10.1128/mBio.00878-20
doi: 10.1128/mBio.00878-20
Paul A (2019) Drug Absorption and Bioavailability BT – Introduction to Basics of Pharmacology and Toxicology: Volume 1: General and Molecular Pharmacology: Principles of Drug Action, in: G.M. Raj, R. Raveendran (Eds.), Springer Singapore, Singapore, 2019, pp. 81–88. https://doi.org/10.1007/978-981-32-9779-1_5
Payandeh J, Minor DL (2015) Bacterial voltage-gated sodium channels (BacNaVs) from the soil, sea, and salt lakes enlighten molecular mechanisms of electrical signaling and pharmacology in the brain and heart. J Mol Biol 427:3. https://doi.org/10.1016/J.JMB.2014.08.010
doi: 10.1016/J.JMB.2014.08.010 pubmed: 25158094
Pinto LH, Holsinger LJ, Lambt RA (1992) Influenza virus MS protein has Ion Channel activity. Cell 69(3):517–528. https://doi.org/10.1016/0092-8674(92)90452-I
doi: 10.1016/0092-8674(92)90452-I pubmed: 1374685
Piselli C, Golla VK, Benz R, Kleinekathöfer U (2023) Importance of the lysine cluster in the translocation of anions through the pyrophosphate specific channel OprO. Biochim Biophys Acta Biomembr 1865(2):184086. https://doi.org/10.1016/j.bbamem.2022.184086
doi: 10.1016/j.bbamem.2022.184086 pubmed: 36370909
Prajapati JD, Kleinekathöfer U, Winterhalter M (2021) How to enter a bacterium: bacterial porins and the permeation of antibiotics. Chem Rev 121:5158–5192. https://doi.org/10.1021/ACS.CHEMREV.0C01213
doi: 10.1021/ACS.CHEMREV.0C01213 pubmed: 33724823
Premkumar A, Wilson L, Ewart GD, Gage PW (2004) Cation-selective ion channels formed by p7 of hepatitis C virus are blocked by hexamethylene amiloride. FEBS Lett 557:99–103. https://doi.org/10.1016/S0014-5793(03)01453-4
doi: 10.1016/S0014-5793(03)01453-4 pubmed: 14741348
Qi S, Wang R, Chaitra GKM, Torres J, Hu X, Fane AG (2016) Aquaporin-based biomimetic reverse osmosis membranes: Stability and long term performance. J Memb Sci 508:94–103. https://doi.org/10.1016/j.memsci.2016.02.013
doi: 10.1016/j.memsci.2016.02.013
Radi MS, SalcedoSora JE, Kim SH, Sudarsan S, Sastry AV, Kell DB, Herrgård MJ, Feist AM (2022) Membrane transporter identification and modulation via adaptive laboratory evolution. Metab Eng 72:376–390. https://doi.org/10.1016/J.YMBEN.2022.05.004
doi: 10.1016/J.YMBEN.2022.05.004 pubmed: 35598887
Ren Q, Paulsen IT (2007) Large-scale comparative genomic analyses of cytoplasmic membrane transport systems in prokaryotes. J Mol Microbiol Biotechnol 12:165–179. https://doi.org/10.1159/000099639
doi: 10.1159/000099639 pubmed: 17587866
Rycovska A, Hatahet L, Fendler K, Michel H (2012) The nitrite transport protein NirC from Salmonella typhimurium is a nitrite/proton antiporter. Biochim et Biophys Acta (BBA) - Biomembr 1818:1342–1350. https://doi.org/10.1016/J.BBAMEM.2012.02.004
doi: 10.1016/J.BBAMEM.2012.02.004
Saier MH Jr, Eng BH, Fard S, Garg J, Haggerty DA, Hutchinson WJ, Jack DL, Lai EC, Liu HJ, Nusinew DP, Omar AM, Pao SS, Paulsen IT, Quan JA, Sliwinski M, Tseng TT, Wachi S, Young GB (1999) Phylogenetic characterization of novel transport protein families revealed by genome analyses. Biochim Biophys Acta 1422:1–56. https://doi.org/10.1016/S0304-4157(98)00023-9
doi: 10.1016/S0304-4157(98)00023-9 pubmed: 10082980
Saier MH, Reddy VS, Moreno-Hagelsieb G, Hendargo KJ, Zhang Y, Iddamsetty V, Lam KJK, Tian N, Russum S, Wang J, Medrano-Soto A (2021) The transporter classification database (TCDB): 2021 update. Nucleic Acids Res 49(D1):D461–D467. https://doi.org/10.1093/nar/gkaa1004
doi: 10.1093/nar/gkaa1004 pubmed: 33170213
Schmidt JDR, Beitz E (2022) Mutational widening of constrictions in a formate-nitrite/H + transporter enables aquaporin-like water permeability and proton conductance. J Biol Chem 298(1):101513. https://doi.org/10.1016/J.JBC.2021.101513
doi: 10.1016/J.JBC.2021.101513 pubmed: 34929166
Schmidt JDR, Walloch P, Höger B, Beitz E (2021) Aquaporins with lactate/lactic acid permeability at physiological pH conditions. Biochimie 188:7–11. https://doi.org/10.1016/j.biochi.2021.01.018
doi: 10.1016/j.biochi.2021.01.018 pubmed: 33577940
Scott AJ, Nittsu A, Kratochvil HT et al (2021) Constructing ion channels from water-soluble α-helical barrels. Nat Chem 13:643–650. https://doi.org/10.1038/s41557-021-00688-0
doi: 10.1038/s41557-021-00688-0 pubmed: 33972753 pmcid: 7611114
Sharma S, Kaushik V, Kulshrestha M, Tiwari V (2023) Different Efflux Pump Systems in Acinetobacter baumannii and their role in Multidrug Resistance. Adv Exp Med Biol 1370:155–168. https://doi.org/10.1007/5584_2023_771
doi: 10.1007/5584_2023_771 pubmed: 36971967
Shen Y-X, Si W, Erbakan M, Kumar M (2015) Highly permeable artificial water channels that can self-assemble into two-dimensional arrays. Proc Natl Acad Sci U S A 112:9810–9815. https://doi.org/10.1073/pnas.1508575112
doi: 10.1073/pnas.1508575112 pubmed: 26216964 pmcid: 4538642
Shiref H, Bergman S, Clivio S, Sahai MA (2021) The fine art of preparing membrane transport proteins for biomolecular simulations: concepts and practical considerations. Methods 185:3–14. https://doi.org/10.1016/J.YMETH.2020.02.009
doi: 10.1016/J.YMETH.2020.02.009 pubmed: 32081744
Singh A, Arkin IT (2022) Targeting viral Ion channels: a promising strategy to curb SARS-CoV-2. Pharmaceuticals (Basel) 15(4):396. https://doi.org/10.3390/PH15040396
doi: 10.3390/PH15040396 pubmed: 35455392
Siria A, Bocquet ML, Bocquet L (2017) New avenues for the large-scale harvesting of blue energy. Nat Reviews Chem 2017 1(11 1):1–10. https://doi.org/10.1038/s41570-017-0091
doi: 10.1038/s41570-017-0091
Soares-Silva I, Ribas D, Sousa-Silva M, Azevedo-Silva J, T Rendulić T, Casal M (2020) Membrane transporters in the bioproduction of organic acids: state of the art and future perspectives for industrial applications. FEMS Microbiol Lett 367(15):118. https://doi.org/10.1093/FEMSLE/FNAA118
doi: 10.1093/FEMSLE/FNAA118
Song W, Joshi H, Chowdhury R et al (2020) Artificial water channels enable fast and selective water permeation through water-wire networks. Nat Nanotechnol 15:73–79. https://doi.org/10.1038/S41565-019-0586-8
doi: 10.1038/S41565-019-0586-8 pubmed: 31844288
Stein WD, Litman T (2014) Channels, carriers, and pumps: an introduction to membrane transport. In An Introduction to Membrane Transport
Strateva T, Yordanov D (2009) Pseudomonas aeruginosa - A phenomenon of bacterial resistance. J Med Microbiol 58:1133–1148. https://doi.org/10.1099/JMM.0.009142-0/CITE/REFWORKS
doi: 10.1099/JMM.0.009142-0/CITE/REFWORKS pubmed: 19528173
Suppmann B, Sawers G (1994) Isolation and characterization of hypophosphite–resistant mutants of Escherichia coli: identification of the FocA protein, encoded by the pfl operon, as a putative formate transporter. Mol Microbiol 11:965–982. https://doi.org/10.1111/J.1365-2958.1994.TB00375.X
doi: 10.1111/J.1365-2958.1994.TB00375.X pubmed: 8022272
Sweet G, Gandor C, Voegele R, Wittekindt N, Beuerle J, Truniger V, Lin EC, Boos W (1990) Glycerol facilitator of Escherichia coli: cloning of glpF and identification of the glpF product. J Bacteriol 172:424–430. https://doi.org/10.1128/JB.172.1.424-430.1990
doi: 10.1128/JB.172.1.424-430.1990 pubmed: 2152911 pmcid: 208448
Sze CW, Tan YJ (2015) Viral membrane channels: role and function in the virus life cycle. Viruses 7(6):3261–3284. https://doi.org/10.3390/v7062771
doi: 10.3390/v7062771 pubmed: 26110585 pmcid: 4488738
Szmelcman S, Schwartz M, Silhavy TJ, Boos W (1976) Maltose Transport in Escherichia coli K12. Eur J Biochem 65:13–19. https://doi.org/10.1111/J.1432-1033.1976.TB10383.X
doi: 10.1111/J.1432-1033.1976.TB10383.X pubmed: 776623
Tanghe A, Van Dijck P, Colavizza D, Thevelein JM (2004) Aquaporin-mediated improvement of freeze tolerance of Saccharomyces cerevisiae is restricted to rapid freezing conditions. Appl Environ Microbiol 70:3377–3382. https://doi.org/10.1128/AEM.70.6.3377-3382.2004
doi: 10.1128/AEM.70.6.3377-3382.2004 pubmed: 15184134 pmcid: 427737
Tong H, Hu Q, Zhu L, Dong X (2019) Prokaryotic Aquaporins Cells 8(11):1316. https://doi.org/10.3390/cells8111316
doi: 10.3390/cells8111316 pubmed: 31653102
Toth AJ (2020) Modelling and optimisation of multi-stage flash distillation and reverse osmosis for desalination of saline process wastewater sources. Membr (Basel) 10:1–18. https://doi.org/10.3390/membranes10100265
doi: 10.3390/membranes10100265
Trchounian K, Trchounian A (2014) Different role of focA and focB encoding formate channels for hydrogen production by Escherichia coli during glucose or glycerol fermentation. Int J Hydrogen Energy 39:20987–20991. https://doi.org/10.1016/J.IJHYDENE.2014.10.074
doi: 10.1016/J.IJHYDENE.2014.10.074
Trias J, Nikaido H (1990) Outer membrane protein D2 catalyzes facilitated diffusion of carbapenems and penems through the outer membrane of Pseudomonas aeruginosa. Antimicrob Agents Chemother 34:52. https://doi.org/10.1128/AAC.34.1.52
doi: 10.1128/AAC.34.1.52 pubmed: 2109575 pmcid: 171519
Turgeson A (2022) Computational studies on polyunsaturated fatty acid uptake and its effects on antimicrobial resistance. Master Theses and Doctoral Dissertations
Ude J, Tripathi V, Buyck JM, Söderholm S, Cunrath O, Fanous J, Claudi B, Egli A, Schleberger C, Hiller S, Bumann D (2021) Outer membrane permeability: antimicrobials and diverse nutrients bypass porins in Pseudomonas aeruginosa. Proc Natl Acad Sci U S A 118(31):e2107644118. https://doi.org/10.1073/pnas.2107644118
doi: 10.1073/pnas.2107644118 pubmed: 34326266 pmcid: 8346889
Valverde-Pérez B, Pape ML, Kjeldgaard AF, Zachariae AA, Schneider C, Hélix-Nielsen C, Zarebska A, Smets BF (2020) Dewatering methanotrophic enrichments intended for single cell protein production using biomimetic aquaporin forward osmosis membranes. Sep Purif Technol 235:116133. https://doi.org/10.1016/J.SEPPUR.2019.116133
doi: 10.1016/J.SEPPUR.2019.116133
Van der Bruggen B, Vandecasteele C (2002) Distillation vs. membrane filtration: overview of process evolutions in seawater desalination. Desalination 143:207–218. https://doi.org/10.1016/S0011-9164(02)00259-X
doi: 10.1016/S0011-9164(02)00259-X
Van Dyk TK (2008) Bacterial efflux transport in Biotechnology. Adv Appl Microbiol 63:231–247. https://doi.org/10.1016/S0065-2164(07)00006-8
doi: 10.1016/S0065-2164(07)00006-8 pubmed: 18395129
Verkman AS (2013) Aquaporins. Curr Biol 23:R52–R55. https://doi.org/10.1016/j.cub.2012.11.025
doi: 10.1016/j.cub.2012.11.025 pubmed: 23347934 pmcid: 3590904
Walloch P, Hansen C, Priegann T, Schade D, Beitz E (2021) Pentafluoro-3-hydroxy-pent-2-en-1-ones potently inhibit FNT-Type lactate transporters from all five human-pathogenic Plasmodium species. ChemMedChem 16:1283–1289. https://doi.org/10.1002/CMDC.202000952
doi: 10.1002/CMDC.202000952 pubmed: 33336890 pmcid: 8247949
Wang Y, Huang Y, Wang J, Cheng C, Huang W, Lu P, Xu YN, Wang P, Yan N, Shi Y (2009) Structure of the formate transporter FocA reveals a pentameric aquaporin-like channel. Nat 2009 462:7272. https://doi.org/10.1038/nature08610
doi: 10.1038/nature08610
Wang K, Xie S, Sun B (2011) Viral proteins function as ion channels. Biochim Biophys Acta Biomembr 1808:510. https://doi.org/10.1016/J.BBAMEM.2010.05.006
doi: 10.1016/J.BBAMEM.2010.05.006
Wang H, Chung TS, Tong YW, Meier W, Chen Z, Hong M, Jeyaseelane K, Armugame A (2011a) Preparation and characterization of pore-suspending biomimetic membranes embedded with aquaporin Z on carboxylated polyethylene glycol polymer cushion. Soft Matter 7:7274–7280. https://doi.org/10.1039/C1SM05527E
doi: 10.1039/C1SM05527E
Wang Y, Liu Y, DeBerg HA, Nomura T, Hoffman MT, Rohde PR, Schulten K, Martinac B, Selvin PR (2014) Single molecule FRET reveals pore size and opening mechanism of a mechano-sensitive ion channel. Elife 3:e01834. https://doi.org/10.7554/ELIFE.01834.001
doi: 10.7554/ELIFE.01834.001 pubmed: 24550255 pmcid: 3925968
Wang Y, Cao G, Xu D, Fan L, Wu X, Ni X, Zhao S, Zheng P, Sun J, Ma Y (2018) A novel Corynebacterium glutamicum l-Glutamate exporter. Appl Environ Microbiol 84(6):e02691–e02617. https://doi.org/10.1128/AEM.02691-17
doi: 10.1128/AEM.02691-17 pubmed: 29330181 pmcid: 5835739
Wang L, Li N, Yu S, Zhou J (2023) Enhancing caffeic acid production in Escherichia coli by engineering the biosynthesis pathway and transporter. Bioresour Technol 368:128320. https://doi.org/10.1016/j.biortech.2022.128320
doi: 10.1016/j.biortech.2022.128320 pubmed: 36379296
Wei PL, Wang QH, Hang BJ, Shi F, Cai J, Huang L, Xu Z (2017) High-level cell-free expression and functional characterization of a novel aquaporin from Photobactetrium profundum SS9. Process Biochem 59:172–179. https://doi.org/10.1016/j.procbio.2017.05.014
doi: 10.1016/j.procbio.2017.05.014
Wen J, Bao J (2019) Engineering Corynebacterium glutamicum triggers glutamic acid accumulation in biotin-rich corn stover hydrolysate. Biotechnol Biofuels 12:1–11. https://doi.org/10.1186/S13068-019-1428-5/TABLES/3
doi: 10.1186/S13068-019-1428-5/TABLES/3
West IC, Stein WD (1973) The kinetics of induction of β-galactoside permease. BBA Sect Nucleic Acids Protein Synthesis 308:161–167. https://doi.org/10.1016/0005-2787(73)90133-0
doi: 10.1016/0005-2787(73)90133-0
Wiechert M, Erler H, Golldack A, Beitz E (2017) A widened substrate selectivity filter of eukaryotic formate-nitrite transporters enables high-level lactate conductance. FEBS J 284:2663–2673. https://doi.org/10.1111/FEBS.14117
doi: 10.1111/FEBS.14117 pubmed: 28544379
Winkelmann G (2001) Microbial Transport systems. Microb Transp Syst. https://doi.org/10.1002/3527600728
doi: 10.1002/3527600728
Wu B, Rambow J, Bock S, Holm-Bertelsen J, Wiechert M, Soares AB, Spielmann T, Beitz E (2015) Identity of a Plasmodium lactate/H + symporter structurally unrelated to human transporters. Nature Communications 2015 6:1 6:1–8. https://doi.org/10.1038/ncomms7284
Wu J, Zhao R, Zhao L, Xu Q, Lv J, Ma F (2023) Sorption of petroleum hydrocarbons before transmembrane transport and the structure, mechanisms and functional regulation of microbial membrane transport systems. J Hazard Mater 441:129963. https://doi.org/10.1016/J.JHAZMAT.2022.129963
doi: 10.1016/J.JHAZMAT.2022.129963
Xia LL, Andersen MF, Helix-Nielsen C, McCutcheon JR (2017) Novel commercial aquaporin flat-sheet membrane for Forward Osmosis. Ind Eng Chem Res 56:11919–11925. https://doi.org/10.1021/acs.iecr.7b02368
doi: 10.1021/acs.iecr.7b02368
Yan J, Guan H, Yu J, Chi D (2013) Acetylcholinesterase biosensor based on assembly of multiwall carbon nanotubes onto liposome bioreactors for detection of organophosphates pesticides. Pestic Biochem Physiol 105:197–202. https://doi.org/10.1016/J.PESTBP.2013.02.003
doi: 10.1016/J.PESTBP.2013.02.003
Yılmaz H, Özkan M (2022) Micropollutant removal capacity and stability of aquaporin incorporated biomimetic thin-film composite membranes. Biotechnol Rep 35:e00745. https://doi.org/10.1016/J.BTRE.2022.E00745
doi: 10.1016/J.BTRE.2022.E00745
Yılmaz H, Erdoğan EM, Ergenekon P, Özkan M (2023) Comparison of ion selectivities of nitrite channel NirC and water channel aquaporin. World J Microbiol Biotechnol 39(5):120. https://doi.org/10.1007/S11274-023-03553-Z
doi: 10.1007/S11274-023-03553-Z pubmed: 36918441
Yu KO, Kim SW, Han SO (2010) Engineering of glycerol utilization pathway for ethanol production by Saccharomyces cerevisiae. Bioresour Technol 101:4157–4161. https://doi.org/10.1016/J.BIORTECH.2010.01.066
doi: 10.1016/J.BIORTECH.2010.01.066 pubmed: 20149645
Zeng JM, Hapuarachchi SV, Shafik SH, Martin RE, Kirk K, van Dooren GG, Lehane AM (2021) Identifying the major lactate transporter of Toxoplasma Gondii tachyzoites. Sci Rep 11(1):6787. https://doi.org/10.1038/S41598-021-86204-3
doi: 10.1038/S41598-021-86204-3 pubmed: 33762657 pmcid: 7991638
Zhang J, Cao J, Jia W, Zhang S, Yan S, Wang Y, Zhang P, Chen HY, Li W, Huang S (2021) Mapping potential Engineering sites of Mycobacterium smegmatis porin A (MspA) to form a nanoreactor. ACS Sens 6:2449–2456. https://doi.org/10.1021/acssensors.1c00792
doi: 10.1021/acssensors.1c00792 pubmed: 34107684
Zhang M, Qiu Z, Yang K, Zhou W, Liu W, Lu J, Guo L (2023) Design, synthesis and antifreeze properties of biomimetic peptoid oligomers. Chem Commun 59:7028–7031. https://doi.org/10.1039/D3CC01062G
doi: 10.1039/D3CC01062G
Zhao Y, Qiu C, Li X et al (2012) Synthesis of robust and high-performance aquaporin-based biomimetic membranes by interfacial polymerization-membrane preparation and RO performance characterization. J Memb Sci 423–424:422–428. https://doi.org/10.1016/J.MEMSCI.2012.08.039
doi: 10.1016/J.MEMSCI.2012.08.039
Zhao Y, Li X, Wei J, Torres J, Fane AG, Wang R, Tang CY (2022a) Optimization of aquaporin loading for performance enhancement of aquaporin-based Biomimetic Thin-Film Composite membranes. Membranes 12(1):32. https://doi.org/10.3390/membranes12010032
doi: 10.3390/membranes12010032
Zhao Y, Song Y, Duan L (2022b) Study on the Effect of Water Flux in Osmotic Microbial Fuel Cells on membrane water content and resistance. Water (Switzerland) 14(6):848. https://doi.org/10.3390/w14060848
doi: 10.3390/w14060848
Zhou C, Lu P (2022) De novo design of membrane transport proteins. Proteins Struct Funct Bioinform 90(10):1800–1806. https://doi.org/10.1002/prot.26336
doi: 10.1002/prot.26336

Auteurs

Melek Özkan (M)

Environmental Engineering Department, Gebze Technical University, Kocaeli, 41400, Türkiye. mozkan@gtu.edu.tr.

Hilal Yılmaz (H)

Environmental Engineering Department, Gebze Technical University, Kocaeli, 41400, Türkiye.

Pınar Ergenekon (P)

Environmental Engineering Department, Gebze Technical University, Kocaeli, 41400, Türkiye.

Esra Meşe Erdoğan (EM)

Environmental Engineering Department, Gebze Technical University, Kocaeli, 41400, Türkiye.

Mustafa Erbakan (M)

Biosystem Engineering Department, Bozok University, Yozgat , 66900, Türkiye.

Classifications MeSH