MehNet: a vigesimal-based model by amino acid melting points generates unique ID numbers for protein sequences.

MehNet melting points protein ID numbers vigesimal digits

Journal

Journal of biomolecular structure & dynamics
ISSN: 1538-0254
Titre abrégé: J Biomol Struct Dyn
Pays: England
ID NLM: 8404176

Informations de publication

Date de publication:
17 Jan 2024
Historique:
medline: 17 1 2024
pubmed: 17 1 2024
entrez: 17 1 2024
Statut: aheadofprint

Résumé

The amino acid encoding plays a pivotal role in machine learning-based methods for predicting protein structure and function, as well as in protein mapping techniques. Additionally, the classification of protein sequences presents its own challenges. The current study aims to assign a constant value to each amino acid, thereby creating distinctions among protein sequences. The datasets used in this study were obtained from the UniProt Knowledgebase. Subsequently, these datasets underwent preprocessing steps, and identical sequences were categorized under the same headings. Each amino acid was ranked based on its respective melting point and was assigned a vigesimal digit. These generated vigesimal digits were subsequently converted to decimal values. The centerpiece of this methodology was the

Identifiants

pubmed: 38230442
doi: 10.1080/07391102.2024.2302937
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1-7

Auteurs

Mehmet Erten (M)

Department of Medical Biochemistry, Fethi Sekin City Hospital, Elazığ, Turkey.

Classifications MeSH