Effects of environmental parameters on spatial and temporal distribution of marine microbial communities in the southern Black Sea.
16S rRNA
ASV
Microbial community
Microbial diversity
eDNA
Journal
Marine environmental research
ISSN: 1879-0291
Titre abrégé: Mar Environ Res
Pays: England
ID NLM: 9882895
Informations de publication
Date de publication:
08 Jan 2024
08 Jan 2024
Historique:
received:
11
05
2023
revised:
27
12
2023
accepted:
07
01
2024
medline:
18
1
2024
pubmed:
18
1
2024
entrez:
17
1
2024
Statut:
aheadofprint
Résumé
The Black Sea is a unique environment with strong and permanent vertical stratification, with a thin layer of oxic zone above and a permanent anoxic zone below. Few high-throughput genomic surveys have been conducted to examine microbiota in the Black Sea. Yet, there is no study on the seasonal and vertical variation in microbial community compositions, driving forces and mechanisms of community assembly. In this study, seasonal, vertical, and spatial microbial assemblages were studied in terms of diversity, abundance, and community structure using 16S rRNA metabarcoding. 16S rRNA metabarcoding confirmed seasonal changes in microbial communities and the presence of distinct microbial groups among different water layers. Taxa belonging to Cyanobiaceae contributed a large fraction of the total biomass and were the most abundant autotrophic bacteria found across the whole water column, including hydrogen sulfide-containing anoxic zone. Temperature, salinity, water density, conductivity, light, chlorophyll-a, O
Identifiants
pubmed: 38232435
pii: S0141-1136(24)00005-9
doi: 10.1016/j.marenvres.2024.106344
pii:
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
106344Informations de copyright
Copyright © 2024 Elsevier Ltd. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.