Switchable tetraplex elements in the heterogeneous nuclear ribonucleoprotein K promoter: micro-environment dictated structural transitions of G/C rich elements.

DNA polymorphism G-quadruplex hairpin hnRNP K i-motif

Journal

Journal of biomolecular structure & dynamics
ISSN: 1538-0254
Titre abrégé: J Biomol Struct Dyn
Pays: England
ID NLM: 8404176

Informations de publication

Date de publication:
18 Jan 2024
Historique:
medline: 18 1 2024
pubmed: 18 1 2024
entrez: 18 1 2024
Statut: aheadofprint

Résumé

We have elucidated the hnRNP K promoter as a hotspot for tetraplex-based molecular switches receptive to micro-environmental stimuli. We have characterised the structural features of four tetraplex-forming loci and identified them as binding sites of transcription factors. These segments form either G-quadruplex or i-motif structures, the structural dynamicity of which has been studied in depth

Identifiants

pubmed: 38235706
doi: 10.1080/07391102.2024.2303378
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

1-18

Auteurs

Debopriya Bose (D)

Department of Biological Sciences, Bose Institute, Kolkata, West Bengal, India.

Nilanjan Banerjee (N)

Department of Biological Sciences, Bose Institute, Kolkata, West Bengal, India.

Ananya Roy (A)

Department of Biological Sciences, Bose Institute, Kolkata, West Bengal, India.

Pallabi Sengupta (P)

Department of Medical Biochemistry and Biophysics, Kemihuset (K), Campus, Umeå, Umeå universitet, Umeå, Sweden.

Subhrangsu Chatterjee (S)

Department of Biological Sciences, Bose Institute, Kolkata, West Bengal, India.

Classifications MeSH