A mathematical, classical stratification modeling approach to disentangling the impact of weather on infectious diseases: A case study using spatio-temporally disaggregated Campylobacter surveillance data for England and Wales.


Journal

PLoS computational biology
ISSN: 1553-7358
Titre abrégé: PLoS Comput Biol
Pays: United States
ID NLM: 101238922

Informations de publication

Date de publication:
Jan 2024
Historique:
received: 10 05 2023
accepted: 27 11 2023
medline: 18 1 2024
pubmed: 18 1 2024
entrez: 18 1 2024
Statut: epublish

Résumé

Disentangling the impact of the weather on transmission of infectious diseases is crucial for health protection, preparedness and prevention. Because weather factors are co-incidental and partly correlated, we have used geography to separate out the impact of individual weather parameters on other seasonal variables using campylobacteriosis as a case study. Campylobacter infections are found worldwide and are the most common bacterial food-borne disease in developed countries, where they exhibit consistent but country specific seasonality. We developed a novel conditional incidence method, based on classical stratification, exploiting the long term, high-resolution, linkage of approximately one-million campylobacteriosis cases over 20 years in England and Wales with local meteorological datasets from diagnostic laboratory locations. The predicted incidence of campylobacteriosis increased by 1 case per million people for every 5° (Celsius) increase in temperature within the range of 8°-15°. Limited association was observed outside that range. There were strong associations with day-length. Cases tended to increase with relative humidity in the region of 75-80%, while the associations with rainfall and wind-speed were weaker. The approach is able to examine multiple factors and model how complex trends arise, e.g. the consistent steep increase in campylobacteriosis in England and Wales in May-June and its spatial variability. This transparent and straightforward approach leads to accurate predictions without relying on regression models and/or postulating specific parameterisations. A key output of the analysis is a thoroughly phenomenological description of the incidence of the disease conditional on specific local weather factors. The study can be crucially important to infer the elusive mechanism of transmission of campylobacteriosis; for instance, by simulating the conditional incidence for a postulated mechanism and compare it with the phenomenological patterns as benchmark. The findings challenge the assumption, commonly made in statistical models, that the transformed mean rate of infection for diseases like campylobacteriosis is a mere additive and combination of the environmental variables.

Identifiants

pubmed: 38236828
doi: 10.1371/journal.pcbi.1011714
pii: PCOMPBIOL-D-23-00748
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1011714

Informations de copyright

Copyright: © 2024 Lo Iacono et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

Auteurs

Giovanni Lo Iacono (G)

Department of Comparative Biomedical Sciences, School of Veterinary Medicine, University of Surrey, Guildford, United Kingdom.
Institute for Sustainability, University of Surrey, Guildford, United Kingdom.
People-Centred Artificial Intelligence Institute, University of Surrey, Guilford, United Kingdom.
Centre for Mathematical and Computational Biology, University of Surrey, Guilford, United Kingdom.

Alasdair J C Cook (AJC)

Department of Comparative Biomedical Sciences, School of Veterinary Medicine, University of Surrey, Guildford, United Kingdom.

Gianne Derks (G)

Centre for Mathematical and Computational Biology, University of Surrey, Guilford, United Kingdom.
Mathematical Institute, Leiden University, Leiden, the Netherlands.

Lora E Fleming (LE)

European Centre for Environment and Human Health, University of Exeter Medical School, Truro, Cornwall, United Kingdom.

Nigel French (N)

New Zealand Food Safety Science & Research Centre, Massey University, Palmerston North, New Zealand.

Emma L Gillingham (EL)

UK Health Security Agency, Chilton, United Kingdom.

Laura C Gonzalez Villeta (LC)

Department of Comparative Biomedical Sciences, School of Veterinary Medicine, University of Surrey, Guildford, United Kingdom.

Clare Heaviside (C)

Institute for Environmental Design and Engineering, University College London, London, United Kingdom.

Roberto M La Ragione (RM)

Department of Comparative Biomedical Sciences, School of Veterinary Medicine, University of Surrey, Guildford, United Kingdom.
School of Biosciences, University of Surrey, Guilford, United Kingdom.

Giovanni Leonardi (G)

UK Health Security Agency, Chilton, United Kingdom.
London School of Hygiene and Tropical Medicine, London, United Kingdom.

Christophe E Sarran (CE)

Met Office, Exeter, United Kingdom.

Sotiris Vardoulakis (S)

Healthy Environments And Lives (HEAL) National Research Network, Australian National University, Canberra, ACT, Australia.

Francis Senyah (F)

UK Health Security Agency, Porton Down, United Kingdom.
Médicines Sans Frontièrs, London, United Kingdom.

Arnoud H M van Vliet (AHM)

Department of Comparative Biomedical Sciences, School of Veterinary Medicine, University of Surrey, Guildford, United Kingdom.

Gordon Nichols (G)

Department of Comparative Biomedical Sciences, School of Veterinary Medicine, University of Surrey, Guildford, United Kingdom.
European Centre for Environment and Human Health, University of Exeter Medical School, Truro, Cornwall, United Kingdom.
UK Health Security Agency, Chilton, United Kingdom.
University of East Anglia, Norwich, United Kingdom.

Classifications MeSH