What are tethering elements?


Journal

Current opinion in genetics & development
ISSN: 1879-0380
Titre abrégé: Curr Opin Genet Dev
Pays: England
ID NLM: 9111375

Informations de publication

Date de publication:
17 Jan 2024
Historique:
received: 05 10 2023
revised: 19 12 2023
accepted: 19 12 2023
medline: 19 1 2024
pubmed: 19 1 2024
entrez: 18 1 2024
Statut: aheadofprint

Résumé

High-resolution Micro-C maps identified a specialized class of regulatory DNAs termed 'tethering elements' (TEs) in Drosophila. These 300-500-bp elements facilitate specific long-range genomic associations or loops. The POZ-containing transcription factor GAF (GAGA-associated factor) contributes to loop formation. Tether-tether interactions accelerate Hox gene activation by distal enhancers, and coordinate transcription of duplicated genes (paralogs) through promoter-promoter associations. Some TEs engage in ultra-long-range enhancer-promoter and promoter-promoter interactions (meta-loops) in the Drosophila brain. We discuss the basis for tether-tether specificity and speculate on the occurrence of similar elements in vertebrate genomes.

Identifiants

pubmed: 38237456
pii: S0959-437X(23)00131-4
doi: 10.1016/j.gde.2023.102151
pii:
doi:

Types de publication

Journal Article Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

102151

Informations de copyright

Copyright © 2023. Published by Elsevier Ltd.

Déclaration de conflit d'intérêts

Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Xiao Li (X)

Lewis-Sigler Institute, Department of Molecular Biology, Princeton University, Princeton, NJ 08540, USA. Electronic address: https://twitter.com/@XiaoLi5525.

Michael Levine (M)

Lewis-Sigler Institute, Department of Molecular Biology, Princeton University, Princeton, NJ 08540, USA. Electronic address: msl2@princeton.edu.

Classifications MeSH