Research on Multimodal Fusion of Temporal Electronic Medical Records.

attention backtracking multimodal adaptation gate multimodal fusion prediction time-series electronic medical records

Journal

Bioengineering (Basel, Switzerland)
ISSN: 2306-5354
Titre abrégé: Bioengineering (Basel)
Pays: Switzerland
ID NLM: 101676056

Informations de publication

Date de publication:
18 Jan 2024
Historique:
received: 07 11 2023
revised: 16 12 2023
accepted: 18 12 2023
medline: 22 1 2024
pubmed: 22 1 2024
entrez: 22 1 2024
Statut: epublish

Résumé

The surge in deep learning-driven EMR research has centered on harnessing diverse data forms. Yet, the amalgamation of diverse modalities within time series data remains an underexplored realm. This study probes a multimodal fusion approach, merging temporal and non-temporal clinical notes along with tabular data. We leveraged data from 1271 myocardial infarction and 6450 stroke inpatients at a Beijing tertiary hospital. Our dataset encompassed static, and time series note data, coupled with static and time series table data. The temporal data underwent a preprocessing phase, padding to a 30-day interval, and segmenting into 3-day sub-sequences. These were fed into a long short-term memory (LSTM) network for sub-sequence representation. Multimodal attention gates were implemented for both static and temporal subsequence representations, culminating in fused representations. An attention-backtracking module was introduced for the latter, adept at capturing enduring dependencies in temporal fused representations. The concatenated results were channeled into an LSTM to yield the ultimate fused representation. Initially, two note modalities were designated as primary modes, and subsequently, the proposed fusion model was compared with comparative models including recent models such as Crossformer. The proposed model consistently exhibited superior predictive prowess in both tasks. Removing the attention-backtracking module led to performance decline. The proposed model consistently shows excellent predictive capabilities in both tasks. The proposed method not only effectively integrates data from the four modalities, but also has a good understanding of how to handle irregular time series data and lengthy clinical texts. An effective method is provided, which is expected to be more widely used in multimodal medical data representation.

Identifiants

pubmed: 38247971
pii: bioengineering11010094
doi: 10.3390/bioengineering11010094
pii:
doi:

Types de publication

Journal Article

Langues

eng

Subventions

Organisme : Beijing Natural Science Foundation
ID : L222006
Organisme : National Natural Science Foundation of China
ID : 82372094
Organisme : National Natural Science Foundation of China
ID : 81971707

Auteurs

Moxuan Ma (M)

School of Biomedical Engineering, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.
Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

Muyu Wang (M)

School of Biomedical Engineering, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.
Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

Binyu Gao (B)

School of Biomedical Engineering, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.
Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

Yichen Li (Y)

School of Biomedical Engineering, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.
Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

Jun Huang (J)

School of Biomedical Engineering, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.
Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

Hui Chen (H)

School of Biomedical Engineering, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.
Beijing Key Laboratory of Fundamental Research on Biomechanics in Clinical Application, Capital Medical University, No. 10, Xitoutiao, You An Men, Fengtai District, Beijing 100069, China.

Classifications MeSH