New insights in the Spanish gene pool of olive (

EST-SNPs Olea europaea conservation cultivars collection genetic characterization

Journal

Frontiers in plant science
ISSN: 1664-462X
Titre abrégé: Front Plant Sci
Pays: Switzerland
ID NLM: 101568200

Informations de publication

Date de publication:
2023
Historique:
received: 26 07 2023
accepted: 13 12 2023
medline: 22 1 2024
pubmed: 22 1 2024
entrez: 22 1 2024
Statut: epublish

Résumé

In Spain, several local studies have highlighted the likely presence of unknown olive cultivars distinct from the approximately 260 ones previously described in the literature. Furthermore, recent advancements in identification techniques have significantly enhanced in terms of efficacy and precision. This scenario motivated a new nationwide prospecting effort aimed at recovering and characterizing new cultivated germplasm using high-throughput molecular markers. In the present study, the use of 96 EST-SNP markers allowed the identification of a considerable amount of new material (173 new genotypes) coming from areas with low intensification of production in different regions of Spain. As a result, the number of distinct national genotypes documented in the World Olive Germplasm Bank of IFAPA, Córdoba (WOGBC-ESP046) increased to 427. Likewise, 65 and 24 new synonymy and homonymy cases were identified, respectively. This rise in the number of different national cultivars allowed to deepen the knowledge about the underlying genetic structure. The great genetic variability of Spanish germplasm was confirmed, and a new hot spot of diversity was identified in the northern regions of La Rioja and Aragon. Analysis of the genetic structure showed a clear separation between the germplasm of southern and northern-northeastern Spain and indicated a significantly higher level of admixture in the latter. Given the expansion of modern olive cultivation with only a few cultivars, this cryptic germplasm is in great danger of disappearing. This underlines the fact that maintaining as many cultivars as possible will increase the genetic variability of the olive gene pool to meet the future challenges of olive cultivation.

Identifiants

pubmed: 38250447
doi: 10.3389/fpls.2023.1267601
pmc: PMC10796691
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1267601

Informations de copyright

Copyright © 2024 Gómez-Gálvez, Ninot, Rodríguez, Compañ, Andreva, Rubio, Aragón, Viñuales-Andreu, Casanova-Gascón, Šatović, Lorite, De la Rosa-Navarro and Belaj.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Auteurs

Francisco Jesús Gómez-Gálvez (FJ)

Mejora Vegetal y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), Centro Alameda del Obispo, Córdoba, Spain.

Antònia Ninot (A)

Fruticultura, Institut de Recerca i Tecnologia Agroalimentàries (IRTA), Mas Bové, Constantí, Tarragona, Spain.

Juan Cano Rodríguez (JC)

Ingeniería y Tecnología Agroalimentaria, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), Centro Venta del Llano, Mengíbar, Jaén, Spain.

Sergio Paz Compañ (SP)

Olivicultura, Instituto Valenciano de Investigaciones Agrarias (IVIA), Moncada, Valencia, Spain.

Javier Ugarte Andreva (JU)

Servicio de Investigación Agraria y Sanidad Vegetal, Gobierno de La Rioja, Logroño, Spain.

Javier Alfonso García Rubio (JAG)

Servicio de Investigación Agraria y Sanidad Vegetal, Gobierno de La Rioja, Logroño, Spain.

Isis Pinilla Aragón (IP)

Servicio de Investigación Agraria y Sanidad Vegetal, Gobierno de La Rioja, Logroño, Spain.

Javier Viñuales-Andreu (J)

Universidad de Zaragoza, Escuela Politécnica Superior de Huesca, Aragón, Spain.

José Casanova-Gascón (J)

Universidad de Zaragoza, Escuela Politécnica Superior de Huesca, Aragón, Spain.

Zlatko Šatović (Z)

Department of Plant Biodiversity, Faculty of Agriculture, University of Zagreb, Zagreb, Croatia.
Centre of Excellence for Biodiversity and Molecular Plant Breeding (CroP-BioDiv), Zagreb, Croatia.

Ignacio Jesús Lorite (IJ)

Mejora Vegetal y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), Centro Alameda del Obispo, Córdoba, Spain.

Raúl De la Rosa-Navarro (R)

Mejora Vegetal y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), Centro Alameda del Obispo, Córdoba, Spain.
Department of Plant Breeding, Institute for Sustainable Agriculture, Spanish National Research Council (IAS-CSIC), Cordoba, Spain.

Angjelina Belaj (A)

Mejora Vegetal y Biotecnología, Instituto Andaluz de Investigación y Formación Agraria, Pesquera, Alimentaria y de la Producción Ecológica (IFAPA), Centro Alameda del Obispo, Córdoba, Spain.

Classifications MeSH