The Effects of DNA Methylation on Cytoplasmic Male Sterility in Sugar Beet.

DNA methylation cytoplasmic male sterility methylated gene sugar beet whole-genome bisulfite sequencing

Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
17 Jan 2024
Historique:
received: 13 12 2023
revised: 02 01 2024
accepted: 03 01 2024
medline: 23 1 2024
pubmed: 23 1 2024
entrez: 23 1 2024
Statut: epublish

Résumé

DNA methylation is widely found in higher plants and can control gene expression by regulation without changing the DNA sequence. In this study, the whole-genome methylation map of sugar beet was constructed by WGBS (whole-genome bisulfite sequencing) technology, and the results of WGBS were verified by bisulfite transformation, indicating that the results of WGBS technology were reliable. In addition, 12 differential methylation genes (DMGs) were identified, which were related to carbohydrate and energy metabolism, pollen wall development, and endogenous hormone regulation. Quantitative real-time PCR (qRT-PCR) showed that 75% of DMG expression levels showed negative feedback with methylation level, indicating that DNA methylation can affect gene expression to a certain extent. In addition, we found hypermethylation inhibited gene expression, which laid a foundation for further study on the molecular mechanism of DNA methylation at the epigenetic level in sugar beet male sterility.

Identifiants

pubmed: 38256191
pii: ijms25021118
doi: 10.3390/ijms25021118
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : National Natural Science Foundation of China
ID : 31771864

Auteurs

Jiamin Weng (J)

School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin 150001, China.

Hui Wang (H)

School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin 150001, China.

Dayou Cheng (D)

School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin 150001, China.

Tianjiao Liu (T)

School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin 150001, China.

Deyong Zeng (D)

School of Medicine and Health, Harbin Institute of Technology, Harbin 150001, China.

Cuihong Dai (C)

School of Medicine and Health, Harbin Institute of Technology, Harbin 150001, China.

Chengfei Luo (C)

School of Chemistry and Chemical Engineering, Harbin Institute of Technology, Harbin 150001, China.

Classifications MeSH