Nuclear and mitochondrial genetic variants associated with mitochondrial DNA copy number.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
24 Jan 2024
Historique:
received: 29 08 2023
accepted: 17 01 2024
medline: 25 1 2024
pubmed: 25 1 2024
entrez: 24 1 2024
Statut: epublish

Résumé

Mitochondrial DNA copy number (mtDNA-CN) is a biomarker for mitochondrial dysfunction associated with several diseases. Previous genome-wide association studies (GWAS) have been performed to unravel underlying mechanisms of mtDNA-CN regulation. However, the identified gene regions explain only a small fraction of mtDNA-CN variability. Most of this data has been estimated from microarrays based on various pipelines. In the present study we aimed to (1) identify genetic loci for qPCR-measured mtDNA-CN from three studies (16,130 participants) using GWAS, (2) identify potential systematic differences between our qPCR derived mtDNA-CN measurements compared to the published microarray intensity-based estimates, and (3) disentangle the nuclear from mitochondrial regulation of the mtDNA-CN phenotype. We identified two genome-wide significant autosomal loci associated with qPCR-measured mtDNA-CN: at HBS1L (rs4895440, p = 3.39 × 10

Identifiants

pubmed: 38267512
doi: 10.1038/s41598-024-52373-0
pii: 10.1038/s41598-024-52373-0
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2083

Subventions

Organisme : Austrian Science Fund (Fonds zur Förderung der Wissenschaftlichen Forschung)
ID : W-1253 DK HOROS
Organisme : EC | European Regional Development Fund (Europski Fond za Regionalni Razvoj)
ID : FESR1157
Organisme : Deutsche Forschungsgemeinschaft (German Research Foundation)
ID : HE 3690/7-1
Organisme : Deutsche Forschungsgemeinschaft (German Research Foundation)
ID : HE 3690/5-1

Informations de copyright

© 2024. The Author(s).

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Auteurs

Adriana Koller (A)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Michele Filosi (M)

Eurac Research, Institute for Biomedicine, Affiliated Institute of the University of Lübeck, Bolzano, Italy.

Hansi Weissensteiner (H)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Federica Fazzini (F)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Mathias Gorski (M)

Department of Genetic Epidemiology, University of Regensburg, Regensburg, Germany.

Cristian Pattaro (C)

Eurac Research, Institute for Biomedicine, Affiliated Institute of the University of Lübeck, Bolzano, Italy.

Sebastian Schönherr (S)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Lukas Forer (L)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Janina M Herold (JM)

Department of Genetic Epidemiology, University of Regensburg, Regensburg, Germany.

Klaus J Stark (KJ)

Department of Genetic Epidemiology, University of Regensburg, Regensburg, Germany.

Patricia Döttelmayer (P)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Andrew A Hicks (AA)

Eurac Research, Institute for Biomedicine, Affiliated Institute of the University of Lübeck, Bolzano, Italy.

Peter P Pramstaller (PP)

Eurac Research, Institute for Biomedicine, Affiliated Institute of the University of Lübeck, Bolzano, Italy.

Reinhard Würzner (R)

Institute of Hygiene and Medical Microbiology, Medical University of Innsbruck, Innsbruck, Austria.

Kai-Uwe Eckardt (KU)

Department of Nephrology and Hypertension, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.
German Chronic Kidney Disease Study, Erlangen, Germany.
Department of Nephrology and Medical Intensive Care, Charité-Universitätsmedizin Berlin, Berlin, Germany.

Iris M Heid (IM)

Department of Genetic Epidemiology, University of Regensburg, Regensburg, Germany.

Christian Fuchsberger (C)

Eurac Research, Institute for Biomedicine, Affiliated Institute of the University of Lübeck, Bolzano, Italy.

Claudia Lamina (C)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria.

Florian Kronenberg (F)

Institute of Genetic Epidemiology, Medical University of Innsbruck, Schöpfstrasse 41, 6020, Innsbruck, Austria. Florian.Kronenberg@i-med.ac.at.

Classifications MeSH