Phylogenomics and topological conflicts in the tribe Anthospermeae (Rubiaceae).
inversions
mitochondrial DNA
mitochondrial DNA insertion
nuclear ribosomal DNA
phylogenetic discordance
plastid DNA
Journal
Ecology and evolution
ISSN: 2045-7758
Titre abrégé: Ecol Evol
Pays: England
ID NLM: 101566408
Informations de publication
Date de publication:
Jan 2024
Jan 2024
Historique:
received:
10
06
2023
revised:
15
11
2023
accepted:
05
12
2023
medline:
26
1
2024
pubmed:
26
1
2024
entrez:
26
1
2024
Statut:
epublish
Résumé
Genome skimming (shallow whole-genome sequencing) offers time- and cost-efficient production of large amounts of DNA data that can be used to address unsolved evolutionary questions. Here we address phylogenetic relationships and topological incongruence in the tribe Anthospermeae (Rubiaceae), using phylogenomic data from the mitochondrion, the nuclear ribosomal cistron, and the plastome. All three genomic compartments resolve relationships in the Anthospermeae; the tribe is monophyletic and consists of three major subclades.
Identifiants
pubmed: 38274863
doi: 10.1002/ece3.10868
pii: ECE310868
pmc: PMC10809029
doi:
Banques de données
Dryad
['10.5061/dryad.80gb5mkx4']
Types de publication
Journal Article
Langues
eng
Pagination
e10868Informations de copyright
© 2024 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.
Déclaration de conflit d'intérêts
The authors declare that no conflicts of interest exist.