Diverse roles played by "Pseudomonas fluorescens complex" volatile compounds in their interaction with phytopathogenic microrganims, pests and plants.
Biocontrol
Biopesticide
Fluorescent Pseudomonas
Induced systemic resistance
Microbial volatile compounds
Plant growth promotion
Journal
World journal of microbiology & biotechnology
ISSN: 1573-0972
Titre abrégé: World J Microbiol Biotechnol
Pays: Germany
ID NLM: 9012472
Informations de publication
Date de publication:
28 Jan 2024
28 Jan 2024
Historique:
received:
29
09
2023
accepted:
15
12
2023
medline:
28
1
2024
pubmed:
28
1
2024
entrez:
28
1
2024
Statut:
epublish
Résumé
Pseudomonas fluorescens complex consists of environmental and some human opportunistic pathogenic bacteria. It includes mainly beneficial and few phytopathogenic species that are common inhabitants of soil and plant rhizosphere. Many members of the group are in fact known as effective biocontrol agents of plant pathogens and as plant growth promoters and for these attitudes they are of great interest for biotechnological applications. The antagonistic activity of fluorescent Pseudomonas is mainly related to the production of several antibiotic compounds, lytic enzymes, lipopeptides and siderophores. Several volatile organic compounds are also synthesized by fluorescent Pseudomonas including different kinds of molecules that are involved in antagonistic interactions with other organisms and in the induction of systemic responses in plants. This review will mainly focus on the volatile compounds emitted by some members of P. fluorescens complex so far identified, with the aim to highlight the role played by these molecules in the interaction of the bacteria with phytopathogenic micro and macro-organisms and plants.
Identifiants
pubmed: 38281212
doi: 10.1007/s11274-023-03873-0
pii: 10.1007/s11274-023-03873-0
doi:
Types de publication
Journal Article
Review
Langues
eng
Sous-ensembles de citation
IM
Pagination
80Informations de copyright
© 2024. The Author(s).
Références
Aghdam NMN, Baghaee-Ravari S, Shiri A (2023) Antimicrobial capacity of Pseudomonas brassicacearum strain EnPb against potato soft rot agent. Eur J Plant Pathol 165:215–231. https://doi.org/10.1007/s10658-022-02600-z
doi: 10.1007/s10658-022-02600-z
Anand A, Chinchilla D, Tan C, Mène-Saffrané L, L’Haridon F, Weisskopf L (2020) Contribution of hydrogen Cyanide to the antagonistic activity of Pseudomonas strains against Phytophthora infestans. Microorganisms 8(8):1144. https://doi.org/10.3390/microorganisms8081144
doi: 10.3390/microorganisms8081144
pubmed: 32731625
pmcid: 7464445
Arrebola E, Tienda S, Vida C, De Vicente A, Cazorla FM (2019) Fitness features involved in the biocontrol interaction of Pseudomonas chlororaphis with host plants: the case study of PcPCL1606. Front Microbiol 10:719. https://doi.org/10.3389/fmicb.2019.00719
doi: 10.3389/fmicb.2019.00719
pubmed: 31024497
pmcid: 6469467
Asghari S, Harighi B, Mozafari AA, Esmaeel Q, Ait Barka E (2019) Screening of endophytic bacteria isolated from domesticated and wild growing grapevines as potential biological control agents against crown gall Disease. Biocontrol 64:723–735
doi: 10.1007/s10526-019-09963-z
Athukorala SN, Fernando WD, Rashid KY, De Kievit T (2010) The role of volatile and non-volatile antibiotics produced by Pseudomonas chlororaphis strain PA23 in its root colonization and control of Sclerotinia Sclerotiorum. Biocontrol Sci Technol 20(8):875–890
doi: 10.1080/09583157.2010.484484
Audrain B, Farag MA, Ryu CM, Ghigo JM (2015) Role of bacterial volatile compounds in bacterial biology. FEMS Microbiol Rev 39(2):222–233
pubmed: 25725014
doi: 10.1093/femsre/fuu013
Bailly A, Weisskopf L (2017) Mining the volatilomes of plant-associated microbiota for new biocontrol solutions. Front Microbiol 8:1638
pubmed: 28890716
pmcid: 5574903
doi: 10.3389/fmicb.2017.01638
Bailly A, Groenhagen U, Schulz S, Geisler M, Eberl L, Weisskopf L (2014) The inter-kingdom volatile signal indole promotes root development by interfering with auxin signalling. The Plant J 80:758–771
pubmed: 25227998
doi: 10.1111/tpj.12666
Blom D, Fabbri C, Connor EC, Schiestl FP, Klauser DR, Boller T, Eberl L, Weisskopf L (2011) Production of plant growth modulating volatiles is widespread among rhizosphere bacteria and strongly depends on culture conditions. Environ Microbiol 13(11):3047–3058
pubmed: 21933319
doi: 10.1111/j.1462-2920.2011.02582.x
Brilli F, Luchi N, Michelozzi M, Calamai L, Cencetti G, Pecori F, Nigrone E, Santini A (2020) Volatile organic compounds (VOC) as biomarkers for detection of Ceratocystis platani. For Pathol 50(4):618
doi: 10.1111/efp.12618
Cho SM, Kang BR, Han SH, Anderson AJ, Park JY, Lee YH, Cho BH, Yang KY, Ryu CM, Kim YC (2008) 2R, 3R-butanediol, a bacterial volatile produced by Pseudomonas chlororaphis O6, is involved in induction of systemic tolerance to drought in A. Thaliana. Mol Plant-Microbe Int 21(8):1067–1075
doi: 10.1094/MPMI-21-8-1067
Cho SM, Kim YH, Anderson AJ, Kim YC (2013) Nitric oxide and hydrogen peroxide production are involved in systemic drought tolerance induced by 2R, 3R-butanediol in Arabidopsis thaliana. Plant Pathol J 29:427
pubmed: 25288971
pmcid: 4174825
doi: 10.5423/PPJ.OA.07.2013.0069
Choi HK, Song GC, Yi HS, Ryu CM (2014) Field evaluation of the bacterial volatile derivative 3-pentanol in priming for induced resistance in pepper. J Chem Ecol 40:882–892. https://doi.org/10.1007/s10886-014-0488-z
doi: 10.1007/s10886-014-0488-z
pubmed: 25149655
Cordero P, Príncipe A, Jofré E, Mori G, Fischer S (2014) Inhibition of the phytopathogenic fungus Fusarium proliferatum by volatile compounds produced by Pseudomonas. Arch Microbiol 196:803–809
pubmed: 25085617
doi: 10.1007/s00203-014-1019-6
Cordovez V, Schop S, Hordijk K, Dupré de Boulois H, Coppens F, Hanssen I, Raaijmakers JM, Carrión VJ (2018) Priming of plant growth promotion by volatiles of root-associated Microbacterium spp. Appl Environ Microbiol 84(22):e01865–e01818
pubmed: 30194105
pmcid: 6210106
doi: 10.1128/AEM.01865-18
Cortes-Barco AM, Hsiang T, Goodwin PH (2010) Induced systemic resistance against three foliar Diseases of Agrostis stolonifera by (2R, 3R)‐butanediol or an isoparaffin mixture. Ann Appl Biol 157(2):179–189
doi: 10.1111/j.1744-7348.2010.00417.x
Dandurishvili N, Toklikishvili N, Ovadis M, Eliashvili P, Giorgobiani N, Keshelava R, Tediashvili M, Vainstein A, Khmel I, Szegedi E, Chernin L (2011) Broad-range antagonistic rhizobacteria Pseudomonas fluorescens and Serratia plymuthica suppress Agrobacterium crown gall tumours on tomato plants. J Appl Microbiol 110(1):341–352
pubmed: 21091861
doi: 10.1111/j.1365-2672.2010.04891.x
Davis TS, Crippen TL, Hofstetter RW, Tomberlin JK (2013) Microbial volatile emissions as insect semiochemicals. J Chem Ecol 39:840–859
pubmed: 23793954
doi: 10.1007/s10886-013-0306-z
De Vrieze M, Pandey P, Bucheli TD, Varadarajan AR, Ahrens CH, Weisskopf L, Bailly A (2015) Volatile organic compounds from native potato-associated Pseudomonas as potential anti-oomycete agents. Front Microbiol 6:1295
pubmed: 26635763
pmcid: 4655239
doi: 10.3389/fmicb.2015.01295
Deng X, Wang X, Li G (2022) Nematicidal effects of volatile organic compounds from microorganisms and plants on plant-parasitic nematodes. Microorganisms 10:1201
pubmed: 35744719
pmcid: 9228967
doi: 10.3390/microorganisms10061201
Etminani F, Harighi B, Mozafari AA (2022) Effect of volatile compounds produced by endophytic bacteria on virulence traits of grapevine crown gall pathogen, Agrobacterium tumefaciens. Sci Rep 12(1):10510
pubmed: 35732688
pmcid: 9217936
doi: 10.1038/s41598-022-14864-w
Fernando WD, Ramarathnam R, Krishnamoorthy AS, Savchuk SC (2005) Identification and use of potential bacterial organic antifungal volatiles in biocontrol. Soil Biol Biochem 37(5):955–964
doi: 10.1016/j.soilbio.2004.10.021
Flury P, Vesga P, Péchy-Tarr M, Aellen N, Dennert F, Hofer N, Kupferschmied KP, Kupferschmied P, Metla Z, Ma Z, Siegfried S, de Weert S, Bloemberg G, Höfte M, Keel CJ, Maurhofer M (2017) Antimicrobial and insecticidal: cyclic lipopeptides and hydrogen Cyanide produced by plant-beneficial Pseudomonas strains CHA0, CMR12a, and PCL1391 contribute to insect killing. Front Microbiol 8:100
pubmed: 28217113
pmcid: 5289993
doi: 10.3389/fmicb.2017.00100
Garrido-Sanz D, Meier-Kolthoff JP, Göker M, Martín M, Rivilla R, Redondo-Nieto M (2016) Genomic and genetic diversity within the Pseudomonas fluorescens complex. PLoS ONE 11(2):e0150183
pubmed: 26915094
pmcid: 4767706
doi: 10.1371/journal.pone.0150183
Garrido-Sanz D, Arrebola E, Martínez-Granero F, García-Méndez S, Muriel C, Blanco-Romero E, Martin M, Rivilla R, Redondo-Nieto M (2017) Classification of isolates from the Pseudomonas fluorescens complex into phylogenomic groups based in group-specific markers. Front Microbiol 8:413
pubmed: 28360897
pmcid: 5350142
doi: 10.3389/fmicb.2017.00413
Gfeller A, Fuchsmann P, De Vrieze M, Gindro K, Weisskopf L (2022) Bacterial volatiles known to inhibit Phytophthora infestans are emitted on potato leaves by Pseudomonas strains. Microorganisms 10(8):1510
pubmed: 35893568
pmcid: 9394277
doi: 10.3390/microorganisms10081510
Giorgio A, De Stradis A, Lo Cantore P, Iacobellis NS (2015) Biocide effects of volatile organic compounds produced by potential biocontrol rhizobacteria on Sclerotinia Sclerotiorum. Front Microbiol 6:1056
pubmed: 26500617
pmcid: 4594563
doi: 10.3389/fmicb.2015.01056
Girard L, Lood C, Höfte M, Vandamme P, Rokni-Zadeh H, van Noort V, Lavigne R, De Mot R (2021) The ever-expanding Pseudomonas Genus: description of 43 new species and partition of the Pseudomonas putida group. Microorganisms 9(8):1766
pubmed: 34442845
pmcid: 8401041
doi: 10.3390/microorganisms9081766
Gomila M, Peña A, Mulet M, Lalucat J, García-Valdés E (2015) Phylogenomics and systematics in Pseudomonas. Front Microbiol 6:214
pubmed: 26074881
pmcid: 4447124
doi: 10.3389/fmicb.2015.00214
Han SH, Lee SJ, Moon JH, Park KH, Yang KY, Cho BH, Kim KY, Kim YW, Lee MC, Anderson AJ, Kim YC (2006) GacS-dependent production of 2R, 3R-butanediol by Pseudomonas chlororaphis O6 is a major determinant for eliciting systemic resistance against Erwinia carotovora but not against Pseudomonas syringae Pv. Tabaci in Tobacco. Mol Plant-Microbe Int 19:924–930
doi: 10.1094/MPMI-19-0924
Heeb S, Haas D (2001) Regulatory roles of the GacS/GacA two-component system in plant-associated and other gram-negative bacteria. Mol Plant-Microbe Int 14(12):1351–1363
doi: 10.1094/MPMI.2001.14.12.1351
Hernández-León R, Rojas-Solís D, Contreras-Pérez M, del Carmen Orozco-Mosqueda M, Macías-Rodríguez LI, Reyes-de la Cruz H, Valenci-Cantero E, Santoyo G (2015) Characterization of the antifungal and plant growth-promoting effects of diffusible and volatile organic compounds produced by Pseudomonas fluorescens strains. Biol Control 81:83–92
doi: 10.1016/j.biocontrol.2014.11.011
Huang CJ, Tsay JF, Chang SY, Yang HP, Wu WS, Chen CY (2012) Dimethyl disulfide is an induced systemic resistance elicitor produced by Bacillus cereus C1L. Pest Manag Sci 68(9):1306–1310
pubmed: 22573612
doi: 10.1002/ps.3301
Hunziker L, Bönisch D, Groenhagen U, Bailly A, Schulz S, Weisskopf L (2015) Pseudomonas strains naturally associated with potato plants produce volatiles with high potential for inhibition of Phytophthora infestans. Appl Environ Microbiol 81(3):821–830
pubmed: 25398872
pmcid: 4292479
doi: 10.1128/AEM.02999-14
Jishma P, Hussain N, Chellappan R, Rajendran R, Mathew J, Radhakrishnan EK (2017) Strain specific variation in plant growth promoting volatile organic compounds production by five different Pseudomonas spp. as confirmed by response of Vigna radiata seedlings. J Appl Microbiol 123(1):204–216
pubmed: 28423218
doi: 10.1111/jam.13474
Kai M, Effmert U, Berg G, Piechulla B (2007) Volatiles of bacterial antagonists inhibit mycelial growth of the plant pathogen Rhizoctonia Solani. Arch Microbiol 187:351–360
pubmed: 17180381
doi: 10.1007/s00203-006-0199-0
Kesarwani M, Hazan R, He J, Que Y, Apidianakis Y, Lesic B, Xiao G, Dekimpe V, Milot S, Deziel E, Lepine F, Rahme LG (2011) A quorum sensing regulated small volatile molecule reduces acute virulence and promotes chronic Infection phenotypes. PLoS Pathog 7(8):192
doi: 10.1371/annotation/a1b0d6de-c6b4-4a5f-97ac-d500fbde806f
Kong HG, Shin TS, Kim TH, Ryu CM (2018) Stereoisomers of the bacterial volatile compound 2, 3-butanediol differently elicit systemic defense responses of pepper against multiple viruses in the field. Front Plant Sci 9:90
pubmed: 29527214
pmcid: 5829544
doi: 10.3389/fpls.2018.00090
Lalucat J, Mulet M, Gomila M, García-Valdés E (2020) Genomics in bacterial taxonomy: impact on the Genus Pseudomonas. Genes 11(2):139
pubmed: 32013079
pmcid: 7074058
doi: 10.3390/genes11020139
Lapouge K, Schubert M, Allain FHT, Haas D (2008) Gac/Rsm signal transduction pathway of γ-proteobacteria: from RNA recognition to regulation of social behaviour. Mol Microbiol 67(2):241–253
pubmed: 18047567
doi: 10.1111/j.1365-2958.2007.06042.x
Lee B, Farag MA, Park HB, Kloepper JW, Lee SH, Ryu CM (2012) Induced resistance by a long-chain bacterial volatile: elicitation of plant systemic defense by a C13 volatile produced by Paenibacillus polymyxa. PLoS ONE 7(11):e48744
pubmed: 23209558
pmcid: 3509098
doi: 10.1371/journal.pone.0048744
Lemfack MC, Gohlke BO, Toguem SMT, Preissner S, Piechulla B, Preissner R (2018) mVOC 2.0: a database of microbial volatiles. Nucleic Acids Res 46(D1):D1261–D1265
pubmed: 29106611
doi: 10.1093/nar/gkx1016
Li Q, Ning P, Zheng L, Huang J, Li G, Hsiang T (2010) Fumigant activity of volatiles of Streptomyces globisporus JK-1 against Penicillium Italicum on Citrus microcarpa. Postharvest Biol Technol 58(2):157–165
doi: 10.1016/j.postharvbio.2010.06.003
Li F, Tang M, Tang X, Sun W, Gong J, Yi Y (2019) Bacillus subtilis–A. Thaliana: a model interaction system for studying the role of volatile organic compounds in the interchange between plants and bacteria. Botany 97(12):661–669
doi: 10.1139/cjb-2019-0093
Lo Cantore P, Giorgio A, Iacobellis NS (2015) Bioactivity of volatile organic compounds produced by Pseudomonas tolaasii. Front Microbiol 6:1082
pubmed: 26500627
pmcid: 4594034
doi: 10.3389/fmicb.2015.01082
Lu Y, Yang Q, Lin Z, Yang X (2020) A modular pathway engineering strategy for the high-level production of β-ionone in Yarrowia Lipolytica. Microb Cell Factories 19:1–13
doi: 10.1186/s12934-020-01309-0
Lu Y, Zeng L, Li M, Yan B, Gao D, Zhou B, Lu W, He Q (2022) Use of GC-IMS for detection of volatile organic compounds to identify mixed bacterial culture medium. AMB Express 12:1–11
doi: 10.1186/s13568-022-01367-0
Maffei ME, Gertsch J, Appendino G (2011) Plant volatiles: production, function and pharmacology. Nat Prod Rep 28(8):1359–1380
pubmed: 21670801
doi: 10.1039/c1np00021g
Maldonado-González MM, Bakker PA, Prieto P, Mercado-Blanco J (2015) A. Thaliana as a tool to identify traits involved in Verticillium Dahliae biocontrol by the olive root endophyte Pseudomonas fluorescens PICF7. Front Microbiol 6:266
pubmed: 25904904
pmcid: 4387922
doi: 10.3389/fmicb.2015.00266
Massawe VC, Hanif A, Farzand A, Mburu DK, Ochola SO, Wu L, Tamir HAS, Gu Q, Wu H, Gao X (2018) Volatile compounds of endophytic Bacillus spp. have biocontrol activity against Sclerotinia Sclerotiorum. Phytopathology 108(12):1373–1385
pubmed: 29927356
doi: 10.1094/PHYTO-04-18-0118-R
Mazzeo PP, Carraro C, Monica A, Capucci D, Pelagatti P, Bianchi F, Agazzi S, Careri M, Raio A, Carta M, Menicucci F, Belli M, Michelozzi M, Bacchi A (2019) Designing a palette of cocrystals based on essential oil constituents for agricultural applications. ACS Sustain Chem Eng 7:17929–17940
doi: 10.1021/acssuschemeng.9b04576
Meldau DG, Meldau S, Hoang LH, Underberg S, Wünsche H, Baldwin IT (2013) Dimethyl disulfide produced by the naturally associated bacterium Bacillus sp B55 promotes Nicotiana attenuata growth by enhancing sulfur nutrition. Plant Cell 25:2731–2747
pubmed: 23903320
pmcid: 3753394
doi: 10.1105/tpc.113.114744
Montes Vidal D, von Rymon-Lipinski AL, Ravella S, Groenhagen U, Herrmann J, Zaburannyi N, Zarbin HG, Varadrajan AR, Ahrens CH, Weisskopf L, Muller R, Schulz S (2017) Long-chain alkyl cyanides: unprecedented volatile compounds released by Pseudomonas and Micromonospora bacteria. Angew Chem Int Ed 56(15):4342–4346
doi: 10.1002/anie.201611940
Montes-Osuna N, Cernava T, Gómez-Lama Cabanás C, Berg G, Mercado-Blanco J (2022) Identification of volatile organic compounds emitted by two beneficial endophytic Pseudomonas strains from olive roots. Plants 11:318
pubmed: 35161300
pmcid: 8840531
doi: 10.3390/plants11030318
Mulet M, Lalucat J, García-Valdés E (2010) DNA sequence-based analysis of the Pseudomonas species. Environ Microbiol 12:1513–1530
pubmed: 20192968
doi: 10.1111/j.1462-2920.2010.02181.x
Nandi M, Selin C, Brassinga AKC, Belmonte MF, Fernando WD, Loewen PC, De Kievit TR (2015) Pyrrolnitrin and hydrogen Cyanide production by Pseudomonas chlororaphis strain PA23 exhibits nematicidal and repellent activity against Caenorhabditis elegans. PLoS ONE 10(4):e0123184
pubmed: 25901993
pmcid: 4406715
doi: 10.1371/journal.pone.0123184
Nandi M, Berry C, Brassinga AKC, Belmonte MF, Fernando WD, Loewen PC, de Kievit TR (2016) Pseudomonas brassicacearum strain DF41 kills Caenorhabditis elegans through biofilm-dependent and biofilm-independent mechanisms. Appl Environ Microbiol 82(23):6889–6898
pubmed: 27637885
pmcid: 5103088
doi: 10.1128/AEM.02199-16
Ni H, Kong WL, Zhang Y, Wu XQ (2022) Effects of volatile organic compounds produced by Pseudomonas aurantiaca ST-TJ4 against Verticillium Dahliae. J Fungi 8(7):697
doi: 10.3390/jof8070697
Palleroni NJ, Kunisawa R, Contopoulou R, Doudoroff M (1973) Nucleic acid homologies in the Genus Pseudomonas. Int J Syst Evol Microbiol 23(4):333–339
Park YS, Dutta S, Ann M, Raaijmakers JM, Park K (2015) Promotion of plant growth by Pseudomonas fluorescens strain SS101 via novel volatile organic compounds. Biochem Biophys Res 461(2):361–365
doi: 10.1016/j.bbrc.2015.04.039
Peñuelas J, Asensio D, Tholl D, Wenke K, Rosenkranz M, Piechulla B, Schnitzler J (2014) Biogenic volatile emissions from the soil. Plant Cell Environ 37(8):1866–1891
pubmed: 24689847
doi: 10.1111/pce.12340
Piechulla B, Lemfack MC, Magnus N (2020) Bioactive bacterial organic volatiles: an overview and critical comments. In: Ryu CM, Weisskopf L, Piechulla B (eds) Bacterial volatile compounds as mediators of airborne interactions. Springer Nature, Singapore Pte Ltd, pp 39–92
doi: 10.1007/978-981-15-7293-7_2
Plyuta VA, Lipasova V, Popova A, Koksharova O, Kuznetsov A, Szegedi E, Chernin L, Khmel I (2016) Influence of volatile organic compounds emitted by Pseudomonas and Serratia strains on Agrobacterium tumefaciens biofilms. Apmis 124(7):586–594
pubmed: 27214244
doi: 10.1111/apm.12547
Plyuta VA, Chernikova AS, Sidorova DE, Kupriyanova EV, Koksharova OA, Chernin LS, Khmel IA (2021) Modulation of A. Thaliana growth by volatile substances emitted by Pseudomonas and Serratia strains. World J Microbiol Biotechnol 37:1–9
doi: 10.1007/s11274-021-03047-w
Popova AA, Koksharova OA, Lipasova VA, Zaitseva JV, Katkova-Zhukotskaya OA, Eremina SI, Mironov AS, Chernin LS, Khmel IA (2014) Inhibitory and toxic effects of volatiles emitted by strains of Pseudomonas and Serratia on growth and survival of selected microorganisms, Caenorhabditis elegans, and Drosophila melanogaster. BioMed Res Int 2014:125704
pubmed: 25006575
pmcid: 4071779
doi: 10.1155/2014/125704
Poveda J (2021) Beneficial effects of microbial volatile organic compounds (MVOCs) in plants. Appl Soil Ecol 168:104118
doi: 10.1016/j.apsoil.2021.104118
Prigigallo MI, De Stradis A, Anand A, Mannerucci F, L’Haridon F, Weisskopf L, Bubici G (2021) Basidiomycetes are particularly sensitive to bacterial volatile compounds: mechanistic insight into the case study of Pseudomonas protegens volatilome against Heterobasidion Abietinum. Front Microbiol 12:684664
pubmed: 34220771
pmcid: 8248679
doi: 10.3389/fmicb.2021.684664
Qadri M, Short S, Gast K, Hernandez J, Wong ACN (2020) Microbiome innovation in agriculture: development of microbial based tools for insect pest management. Front Sustain Food Syst 4:547751
doi: 10.3389/fsufs.2020.547751
Raio A, Reveglia P, Puopolo G, Cimmino A, Danti R, Evidente A (2017) Involvement of phenazine-1-carboxylic acid in the interaction between Pseudomonas chlororaphis subsp. aureofaciens strain M71 and Seiridium Cardinale in vivo. Microbiol Res 199:49–56
pubmed: 28454709
doi: 10.1016/j.micres.2017.03.003
Raio A, Brilli F, Baraldi R, Neri L, Puopolo G (2020) Impact of spontaneous mutations on physiological traits and biocontrol activity of Pseudomonas chlororaphis M71. Microbiol Res 239:126517
pubmed: 32535393
doi: 10.1016/j.micres.2020.126517
Raza W, Ling N, Liu D, Wei Z, Huang Q, Shen Q (2016) Volatile organic compounds produced by Pseudomonas fluorescens WR-1 restrict the growth and virulence traits of Ralstonia solanacearum. Microbiol Res 192:103–113
pubmed: 27664728
doi: 10.1016/j.micres.2016.05.014
Rui Z, Li X, Zhu X, Liu J, Domigan B, Barr I, Cate JHD, Zhang W (2014) Microbial biosynthesis of medium-chain 1-alkenes by a nonheme iron oxidase. Proc Natl Acad Sci 111(51):18237–18242
pubmed: 25489112
pmcid: 4280606
doi: 10.1073/pnas.1419701112
Ryu CM, Farag MA, Hu CH, Reddy MS, Wei HX, Paré PW, Kloepper JW (2003) Bacterial volatiles promote growth in Arabidopsis. Proc Natl Acad Sci 100(8):4927–4932
pubmed: 12684534
pmcid: 153657
doi: 10.1073/pnas.0730845100
Ryu CM, Farag MA, Hu CH, Reddy MS, Kloepper JW, Paré PW (2004) Bacterial volatiles induce systemic resistance in Arabidopsis. Plant Physiol 134(3):1017–1026
pubmed: 14976231
pmcid: 389924
doi: 10.1104/pp.103.026583
Schulz-Bohm K, Martín-Sánchez L, Garbeva P (2017) Microbial volatiles: small molecules with an important role in intra-and inter-kingdom interactions. Front Microbiol 8:2484
pubmed: 29312193
pmcid: 5733050
doi: 10.3389/fmicb.2017.02484
Sharifi R, Ryu CM (2018) Sniffing bacterial volatile compounds for healthier plants. Curr Opin Plant Biol 44:88–97
pubmed: 29579577
doi: 10.1016/j.pbi.2018.03.004
Sidorova DE, Skripka MI, Khmel IA, Koksharova OA, Plyuta VA (2022) Effects of volatile organic compounds on biofilms and swimming motility of Agrobacterium tumefaciens. Microorganisms 10(8):1512
pubmed: 35893570
pmcid: 9394263
doi: 10.3390/microorganisms10081512
Song GC, Ryu CM (2013) Two volatile organic compounds trigger plant self-defence against a bacterial pathogen and a sucking insect in cucumber under open field conditions. Int J Mol Sci 14(5):9803–9819
pubmed: 23698768
pmcid: 3676814
doi: 10.3390/ijms14059803
Spraker JE, Jewell K, Roze LV, Scherf J, Ndagano D, Beaudry R, Linz JE, Allen C, Keller NP (2014) A volatile relationship: profiling an inter-kingdom dialogue between two plant pathogens, Ralstonia solanacearum and aspergillus flavus. J Chem Ecol 40:502–513
pubmed: 24801606
doi: 10.1007/s10886-014-0432-2
Strano CP, Bella P, Licciardello G, Caruso A, Catara V (2017) Role of secondary metabolites in the biocontrol activity of Pseudomonas corrugata and Pseudomonas mediterranea. Eur J Plant Pathol 149:103–115
doi: 10.1007/s10658-017-1169-x
Tahir HA, Gu Q, Wu H, Raza W, Hanif A, Wu L, Colman MV, Gao X (2017) Plant growth promotion by volatile organic compounds produced by Bacillus subtilis SYST2. Front Microbiol 8:171
pubmed: 28223976
pmcid: 5293759
doi: 10.3389/fmicb.2017.00171
Tilocca B, Cao A, Migheli Q (2020) Scent of a killer: microbial volatilome and its role in the biological control of plant pathogens. Front Microbiol 11:41
pubmed: 32117096
pmcid: 7018762
doi: 10.3389/fmicb.2020.00041
Vaishnav A, Kumari S, Jain S, Varma A, Choudhary DK (2015) Putative bacterial volatile-mediated growth in soybean (Glycine max L. Merrill) and expression of induced proteins under salt stress. J Appl Microbiol 119(2):539–551
pubmed: 26042866
doi: 10.1111/jam.12866
van de Mortel JE, de Vos RC, Dekkers E, Pineda A, Guillod L, Bouwmeester K, van Loon JJA, Dicke M, Raaijmakers JM (2012) Metabolic and transcriptomic changes induced in A. Thaliana by the rhizobacterium Pseudomonas fluorescens SS101. Plant Physiol 160(4):2173–2188
pubmed: 23073694
pmcid: 3510139
doi: 10.1104/pp.112.207324
Veselova MA, Plyuta VA, Khmel IA (2019) Volatile compounds of bacterial origin: structure, biosynthesis, and biological activity. Microbiology 88:261–274
doi: 10.1134/S0026261719030160
Vespermann A, Kai M, Piechulla B (2007) Rhizobacterial volatiles affect the growth of fungi and A. Thaliana. Appl Environ Microbiol 73(17):5639–5641
pubmed: 17601806
pmcid: 2042089
doi: 10.1128/AEM.01078-07
Wang Y, Li Y, Yang J, Ruan J, Sun C (2016) Microbial volatile organic compounds and their application in microorganism identification in foodstuff. Trends Anal Chem 78:1–16
doi: 10.1016/j.trac.2015.08.010
Wang Z, Mei X, Du M, Chen K, Jiang M, Wang K, Zalan Z, Kan J (2020) Potential modes of action of Pseudomonas fluorescens ZX during biocontrol of blue mould decay on postharvest citrus. J Sci Food Agric 100(2):744–754
pubmed: 31637724
doi: 10.1002/jsfa.10079
Wang Z, Zhong T, Chen K, Du M, Chen G, Chen X, Wang K, Zalan Z, Takacs K, Kan J (2021) Antifungal activity of volatile organic compounds produced by Pseudomonas fluorescens ZX and potential biocontrol of blue mould decay on postharvest citrus. Food Control 120:107499
doi: 10.1016/j.foodcont.2020.107499
Way JL (1984) Cyanide intoxication and its mechanism of antagonism. Ann Rev Pharmacol Toxicol 24:451–481
doi: 10.1146/annurev.pa.24.040184.002315
Weisskopf L, Schulz S, Garbeva P (2021) Microbial volatile organic compounds in intra-kingdom and inter-kingdom interactions. Nat Rev Microbiol 19:391–404
pubmed: 33526910
doi: 10.1038/s41579-020-00508-1
Yamamoto S, Kasai H, Arnold DL, Jackson RW, Vivian A, Harayama S (2000) Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genesThe GenBank accession numbers for the sequences determined in this work are: gyrB, D37926, D37297, D86005–D86019 and AB039381–AB039492; rpoD, D86020–D86036 and AB039493–AB039624. Microbiology 146(10):2385–2394
pubmed: 11021915
doi: 10.1099/00221287-146-10-2385
Zhang H, Kim MS, Krishnamachari V, Payton P, Sun Y, Grimson M, Farag MA, Ryu CM, Allen R, Melo IS, Paré PW (2007) Rhizobacterial volatile emissions regulate auxin homeostasis and cell expansion in. Arabidopsis Planta 226:839–851
pubmed: 17497164
Zhang Y, Li T, Liu Y, Li X, Zhang C, Feng Z, Li Z, Qin S, Xing K (2019) Volatile organic compounds produced by Pseudomonas chlororaphis subsp. aureofaciens SPS-41 as biological fumigants to control Ceratocystis fimbriata in postharvest sweet potatoes. J Agri Food Chem 67(13):3702–3710
doi: 10.1021/acs.jafc.9b00289
Zhang CM, Xu MJ, Gong Y, Li XW, Huang JJ, Zhou SF, Xing K, Qin S (2020) Identification and characterization of nematicidal activity of organic volatiles from a pseudomonad rhizobacterium. Rhizosphere 16:100244
doi: 10.1016/j.rhisph.2020.100244
Zhang Y, Kong WL, Wu XQ, Li PS (2022) Inhibitory effects of phenazine compounds and volatile organic compounds produced by Pseudomonas aurantiaca ST-TJ4 against Phytophthora cinnamomi. Phytopathology 112(9):1867–1876
pubmed: 35263163
doi: 10.1094/PHYTO-10-21-0442-R
Zhao Q, Cao J, Cai X, Wang J, Kong F, Wang D, Wang J (2023) Antagonistic activity of volatile organic compounds produced by acid-tolerant Pseudomonas protegens CLP-6 as biological fumigants to control Tobacco bacterial wilt caused by Ralstonia solanacearum. Appl Environ Microbiol 89(2):e01892–e01822
pubmed: 36722969
pmcid: 9972909
doi: 10.1128/aem.01892-22
Zhong T, Wang Z, Zhang M, Wei X, Kan J, Zalán Z, Wang K, Du M (2021) Volatile organic compounds produced by Pseudomonas fluorescens ZX as potential biological fumigants against gray mold on postharvest grapes. Biol Control 163:104754
doi: 10.1016/j.biocontrol.2021.104754
Zhou JY, Li X, Zheng JY, Dai CC (2016) Volatiles released by endophytic Pseudomonas fluorescens promoting the growth and volatile oil accumulation in Atractylodes Lancea. Plant Physiol Biochem 101:132–140
pubmed: 26874622
doi: 10.1016/j.plaphy.2016.01.026