Identification and expression analysis of expansin gene family in Salvia miltiorrhiza.

ABA Abiotic stress Bioinformatics Expansin Salvia miltiorrhiza Subcellular localization

Journal

Chinese medicine
ISSN: 1749-8546
Titre abrégé: Chin Med
Pays: England
ID NLM: 101265109

Informations de publication

Date de publication:
04 Feb 2024
Historique:
received: 16 08 2023
accepted: 27 11 2023
medline: 5 2 2024
pubmed: 5 2 2024
entrez: 4 2 2024
Statut: epublish

Résumé

Expansins (EXP) are important enzymes that are involved in the extension of plant cells and regulation of root configurations, which play important roles in resisting various stresses. As a model medicinal plant, Salvia miltiorrhiza is well recognized for treating coronary heart disease, myocardial infection, and other cardiovascular and cerebrovascular diseases; however, the SmEXP gene family has not yet been analyzed. The SmEXP family was systematically analyzed using bioinformatics. Quantitative real-time PCR was employed to analyze the tissue expression patterns of the SmEXP family, as well as its expression under abscisic acid (ABA) treatment and abiotic stress. Subcellular localization assay revealed the localization of SmEXLA1, SmEXLB1, and SmEXPA2. This study identified 29 SmEXP that belonged to four different subfamilies. SmEXP promoter analysis suggested that it may be involved in the growth, development, and stress adaptation of S. miltiorrhiza. An analysis of the expression patterns of SmEXP revealed that ABA, Cu For this study, the SmEXP family was systematically analyzed for the first time, which lays a foundation for further elucidating its physiological and biological functionality.

Sections du résumé

BACKGROUND BACKGROUND
Expansins (EXP) are important enzymes that are involved in the extension of plant cells and regulation of root configurations, which play important roles in resisting various stresses. As a model medicinal plant, Salvia miltiorrhiza is well recognized for treating coronary heart disease, myocardial infection, and other cardiovascular and cerebrovascular diseases; however, the SmEXP gene family has not yet been analyzed.
METHODS METHODS
The SmEXP family was systematically analyzed using bioinformatics. Quantitative real-time PCR was employed to analyze the tissue expression patterns of the SmEXP family, as well as its expression under abscisic acid (ABA) treatment and abiotic stress. Subcellular localization assay revealed the localization of SmEXLA1, SmEXLB1, and SmEXPA2.
RESULTS RESULTS
This study identified 29 SmEXP that belonged to four different subfamilies. SmEXP promoter analysis suggested that it may be involved in the growth, development, and stress adaptation of S. miltiorrhiza. An analysis of the expression patterns of SmEXP revealed that ABA, Cu
CONCLUSION CONCLUSIONS
For this study, the SmEXP family was systematically analyzed for the first time, which lays a foundation for further elucidating its physiological and biological functionality.

Identifiants

DOI: 10.1186/s13020-023-00867-w PMID: 38311790
pubmed: 38311790
doi: 10.1186/s13020-023-00867-w
pii: 10.1186/s13020-023-00867-w
doi:

Types de publication

Journal Article

Langues

eng

Pagination

22

Subventions

Organisme : The National Natural Science Foundation of China
ID : 32170378
Organisme : The National Natural Science Foundation of China
ID : 31900254
Organisme : The Fundamental Research Funds for the Central Universities
ID : GK202205002
Organisme : The Fundamental Research Funds for the Central Universities
ID : GK202205003
Organisme : The Project of Shaanxi Science and Technology Department
ID : 2020JM-628
Organisme : The Basic Research Project of Shaanxi Academy of Sciences
ID : 2023k-23

Informations de copyright

© 2024. The Author(s).

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Auteurs

Yunyun Li (Y)

Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Shaanxi Normal University, Xi'an, 710062, China.

Bin Li (B)

Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Shaanxi Normal University, Xi'an, 710062, China.
Xi'an Botanical Garden of Shaanxi Province (Institute of Botany of Shaanxi Province), Xi'an, China.

Qiyue Pang (Q)

Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Shaanxi Normal University, Xi'an, 710062, China.

Yaoyu Lou (Y)

Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Shaanxi Normal University, Xi'an, 710062, China.

Donghao Wang (D)

Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Shaanxi Normal University, Xi'an, 710062, China. wangdonghao@snnu.edu.cn.

Zhezhi Wang (Z)

Key Laboratory of the Ministry of Education for Medicinal Resources and Natural Pharmaceutical Chemistry, National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest of China, Shaanxi Normal University, Xi'an, 710062, China. zzwang@snnu.edu.cn.
ORCID: 0000-0002-6111-1551

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