Structural effects of inosine substitution in telomeric DNA quadruplex.

CD spectra G-I mutation G-quadruplex inosine telomeric repeats

Journal

Frontiers in chemistry
ISSN: 2296-2646
Titre abrégé: Front Chem
Pays: Switzerland
ID NLM: 101627988

Informations de publication

Date de publication:
2024
Historique:
received: 30 10 2023
accepted: 08 01 2024
medline: 5 2 2024
pubmed: 5 2 2024
entrez: 5 2 2024
Statut: epublish

Résumé

The telomeric DNA, a distal region of eukaryotic chromosome containing guanine-rich repetitive sequence of (TTAGGG)n, has been shown to adopt higher-order structures, specifically G-quadruplexes (G4s). Previous studies have demonstrated the implication of G4 in tumor inhibition through chromosome maintenance and manipulation of oncogene expression featuring their G-rich promoter regions. Besides higher order structures, several regulatory roles are attributed to DNA epigenetic markers. In this work, we investigated how the structural dynamics of a G-quadruplex, formed by the telomeric sequence, is affected by inosine, a prevalent modified nucleotide. We used the standard (TTAGGG)

Identifiants

pubmed: 38312345
doi: 10.3389/fchem.2024.1330378
pii: 1330378
pmc: PMC10834636
doi:

Types de publication

Journal Article

Langues

eng

Pagination

1330378

Informations de copyright

Copyright © 2024 Zheng, Dartawan, Wu, Wu, Zhang, Lu, Hu, Vangaveti and Sheng.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Auteurs

Ya Ying Zheng (YY)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Ricky Dartawan (R)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Yuhan Wu (Y)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Chengze Wu (C)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Hope Zhang (H)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Jeanne Lu (J)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Ashley Hu (A)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Sweta Vangaveti (S)

The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Jia Sheng (J)

Department of Chemistry, Albany, NY, United States.
The RNA Institute, University at Albany, State University of New York, Albany, NY, United States.

Classifications MeSH