Expansion of the neurodevelopmental phenotype of individuals with EEF1A2 variants and genotype-phenotype study.


Journal

European journal of human genetics : EJHG
ISSN: 1476-5438
Titre abrégé: Eur J Hum Genet
Pays: England
ID NLM: 9302235

Informations de publication

Date de publication:
15 Feb 2024
Historique:
received: 16 06 2023
accepted: 01 02 2024
revised: 10 01 2024
medline: 15 2 2024
pubmed: 15 2 2024
entrez: 15 2 2024
Statut: aheadofprint

Résumé

Translation elongation factor eEF1A2 constitutes the alpha subunit of the elongation factor-1 complex, responsible for the enzymatic binding of aminoacyl-tRNA to the ribosome. Since 2012, 21 pathogenic missense variants affecting EEF1A2 have been described in 42 individuals with a severe neurodevelopmental phenotype including epileptic encephalopathy and moderate to profound intellectual disability (ID), with neurological regression in some patients. Through international collaborative call, we collected 26 patients with EEF1A2 variants and compared them to the literature. Our cohort shows a significantly milder phenotype. 83% of the patients are walking (vs. 29% in the literature), and 84% of the patients have language skills (vs. 15%). Three of our patients do not have ID. Epilepsy is present in 63% (vs. 93%). Neurological examination shows a less severe phenotype with significantly less hypotonia (58% vs. 96%), and pyramidal signs (24% vs. 68%). Cognitive regression was noted in 4% (vs. 56% in the literature). Among individuals over 10 years, 56% disclosed neurocognitive regression, with a mean age of onset at 2 years. We describe 8 novel missense variants of EEF1A2. Modeling of the different amino-acid sites shows that the variants associated with a severe phenotype, and the majority of those associated with a moderate phenotype, cluster within the switch II region of the protein and thus may affect GTP exchange. In contrast, variants associated with milder phenotypes may impact secondary functions such as actin binding. We report the largest cohort of individuals with EEF1A2 variants thus far, allowing us to expand the phenotype spectrum and reveal genotype-phenotype correlations.

Identifiants

pubmed: 38355961
doi: 10.1038/s41431-024-01560-8
pii: 10.1038/s41431-024-01560-8
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2024. The Author(s), under exclusive licence to European Society of Human Genetics.

Références

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Auteurs

Alix Paulet (A)

Département de Génétique, Hôpital Robert-Debré, Paris, France. alix.paulet@hotmail.fr.

Cavan Bennett-Ness (C)

Centre for Genomic and Experimental Medicine and Simons Initiative for the Developing Brain, Institute of Genetics and Cancer, Edinburgh, Scotland, UK.

Faustine Ageorges (F)

Département de Génétique, Hôpital Robert-Debré, Paris, France.

Detlef Trost (D)

Laboratoire Cerba, Saint-Ouen l'Aumône, France.

Andrew Green (A)

UCD School of Medicine and Medical Science Consultant in Clinical Genetics, Dublin, Ireland.

David Goudie (D)

Regional Genetics Service, NHS Tayside, Dundee, Scotland, UK.

Rosalyn Jewell (R)

Yorkshire Regional Genetics Service, Leeds Teaching Hospitals NHS Trust, Leeds, England, UK.

Minna Kraatari-Tiri (M)

Department of Clinical Genetics, Research unit of Clinical Medicine, Medical Research Center Oulu, Oulu, Finland.
Oulu University Hospital and University of Oulu, Oulu, Finland.

Juliette Piard (J)

Centre de Génétique Humaine, CHU Besançon, Besançon, France.

Christine Coubes (C)

Service de Génétique Médicale, CHU de Montpellier, Montpellier, France.

Wayne Lam (W)

South-East of Scotland Clinical Genetics Service, General Hospital, Edinburgh, Scotland, UK.

Sally Ann Lynch (SA)

Clinical Genetics, Children's Health Ireland, Dublin, Ireland.

Groeschel Samuel (G)

Department of Neuropediatrics, University Children's Hospital, Tuebingen, Germany.

Francis Ramond (F)

Service de Génétique, CHU Saint-Etienne - Hôpital Nord, Saint-Etienne, France.

Joël Fluss (J)

University Hospitals of Geneva, Geneva, Switzerland.

Christina Fagerberg (C)

Department of Clinical Genetics, Odense University Hospital, Odense, Denmark.

Charlotte Brasch Andersen (C)

Human Genetik, Syddansk Universitet, Odense, Denmark.

Konstantinos Varvagiannis (K)

Service de Médecine Génétique, Hôpitaux universitaires de Genève, Geneva, Switzerland.

Tjitske Kleefstra (T)

Department of Clinical Genetics, Erasmus MC University Medical Center, Rotterdam, The Netherlands.
Department of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.
Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, The Netherlands.
Center of Excellence for Neuropsychiatry, Vincent van Gogh Institute for Psychiatry, Venray, The Netherlands.

Bénédicte Gérard (B)

Molecular Biology, Nouvel Hôpital Civil, Strasbourg, France.

Mélanie Fradin (M)

Service de Génétique Médicale, Hôpital Sud, CHU de Rennes, Rennes, France.

Antonio Vitobello (A)

UMR-Inserm, Génétique des Anomalies du développement, Université de Bourgogne Franche-Comté, Dijon, France.

Romano Tenconi (R)

Servizio di Genetica Medica, Dipartimento di Pediatra, Padova, Italia.

Anne-Sophie Denommé-Pichon (AS)

Unité Fonctionnelle Innovation en Diagnostic génomique des maladies rares, FHU-TRANSLAD, CHU Dijon Bourgogne, Dijon, France.
UMR1231 GAD, Inserm - Université Bourgogne-Franche Comté, Dijon, France.

Aline Vincent-Devulder (A)

Génétique Médicale, CHU de Caen, Caen, France.

Tobias Haack (T)

Institute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, Germany.

Joseph A Marsh (JA)

MRC Human Genetics Unit, Western General Hospital, University of Edinburgh, Edinburgh, Scotland, UK.

Lone Walentin Laulund (LW)

H C Andersen Children's Hospital, Odense University Hospital, Odense, Denmark.

Mona Grimmel (M)

Institute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, Germany.

Angelika Riess (A)

Institute of Medical Genetics and Applied Genomics, University of Tübingen, Tübingen, Germany.

Elke de Boer (E)

Department of Clinical Genetics, Erasmus MC University Medical Center, Rotterdam, The Netherlands.
Department of Human Genetics, Radboud University Medical Center, Nijmegen, The Netherlands.
Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, The Netherlands.

Sergio Padilla-Lopez (S)

Pediatric Movement Disorders Program, Division of Pediatric Neurology, Barrow Neurological Institute, Phoenix Children's Hospital, Phoenix, AZ, USA.

Somayeh Bakhtiari (S)

Pediatric Movement Disorders Program, Division of Pediatric Neurology, Barrow Neurological Institute, Phoenix Children's Hospital, Phoenix, AZ, USA.

Michael C Kruer (MC)

Pediatric Movement Disorders Program, Division of Pediatric Neurology, Barrow Neurological Institute, Phoenix Children's Hospital, Phoenix, AZ, USA.

Jonathan Levy (J)

Département de Génétique, Hôpital Robert-Debré, Paris, France.

Alain Verloes (A)

Département de Génétique, Hôpital Robert-Debré, Paris, France.

Catherine M Abbott (CM)

Centre for Genomic and Experimental Medicine and Simons Initiative for the Developing Brain, Institute of Genetics and Cancer, Edinburgh, Scotland, UK.

Lyse Ruaud (L)

Département de Génétique, Hôpital Robert-Debré, Paris, France.

Classifications MeSH