Accuracy of automated segmentation and volumetry of acute intracerebral hemorrhage following minimally invasive surgery using a patch-based convolutional neural network in a small dataset.

Automated volumetry Convolutional neural network Intracerebral hemorrhage Machine learning Minimally invasive surgery

Journal

Neuroradiology
ISSN: 1432-1920
Titre abrégé: Neuroradiology
Pays: Germany
ID NLM: 1302751

Informations de publication

Date de publication:
17 Feb 2024
Historique:
received: 04 12 2023
accepted: 08 02 2024
medline: 17 2 2024
pubmed: 17 2 2024
entrez: 17 2 2024
Statut: aheadofprint

Résumé

In cases of acute intracerebral hemorrhage (ICH) volume estimation is of prognostic and therapeutic value following minimally invasive surgery (MIS). The ABC/2 method is widely used, but suffers from inaccuracies and is time consuming. Supervised machine learning using convolutional neural networks (CNN), trained on large datasets, is suitable for segmentation tasks in medical imaging. Our objective was to develop a CNN based machine learning model for the segmentation of ICH and of the drain and volumetry of ICH following MIS of acute supratentorial ICH on a relatively small dataset. Ninety two scans were assigned to training (n = 29 scans), validation (n = 4 scans) and testing (n = 59 scans) datasets. The mean age (SD) was 70 (± 13.56) years. Male patients were 36. A hierarchical, patch-based CNN for segmentation of ICH and drain was trained. Volume of ICH was calculated from the segmentation mask. The best performing model achieved a Dice similarity coefficient of 0.86 and 0.91 for the ICH and drain respectively. Automated ICH volumetry yielded high agreement with ground truth (Intraclass correlation coefficient = 0.94 [95% CI: 0.91, 0.97]). Average difference in the ICH volume was 1.33 mL. Using a relatively small dataset, originating from different CT-scanners and with heterogeneous voxel dimensions, we applied a patch-based CNN framework and successfully developed a machine learning model, which accurately segments the intracerebral hemorrhage (ICH) and the drains. This provides automated and accurate volumetry of the bleeding in acute ICH treated with minimally invasive surgery.

Identifiants

pubmed: 38367095
doi: 10.1007/s00234-024-03311-4
pii: 10.1007/s00234-024-03311-4
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© 2024. The Author(s).

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Auteurs

Samer Elsheikh (S)

Department of Neuroradiology, Faculty of Medicine, Medical Center - University of Freiburg, Breisacherstr. 64, 79106, Freiburg, Germany. samer.elsheikh@uniklinik-freiburg.de.

Ahmed Elbaz (A)

Department of Neuroradiology, Faculty of Medicine, Medical Center - University of Freiburg, Breisacherstr. 64, 79106, Freiburg, Germany.

Alexander Rau (A)

Department of Neuroradiology, Faculty of Medicine, Medical Center - University of Freiburg, Breisacherstr. 64, 79106, Freiburg, Germany.
Department of Diagnostic and Interventional Radiology, Faculty of Medicine, Medical Center - University of Freiburg, Freiburg, Germany.

Theo Demerath (T)

Department of Neuroradiology, Faculty of Medicine, Medical Center - University of Freiburg, Breisacherstr. 64, 79106, Freiburg, Germany.

Christian Fung (C)

Department of Neurosurgery, Faculty of Medicine, Medical Center - University of Freiburg, Freiburg, Germany.

Elias Kellner (E)

Medical Physics, Department of Diagnostic and Interventional Radiology, Medical Center, Faculty of Medicine, University of Freiburg, Freiburg, Germany.

Horst Urbach (H)

Department of Neuroradiology, Faculty of Medicine, Medical Center - University of Freiburg, Breisacherstr. 64, 79106, Freiburg, Germany.

Marco Reisert (M)

Medical Physics, Department of Diagnostic and Interventional Radiology, Medical Center, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
Department of Stereotactic and Functional Neurosurgery, Faculty of Medicine, Medical Center - University of Freiburg, Freiburg, Germany.

Classifications MeSH