Tracer-based lipidomics enables the discovery of disease-specific candidate biomarkers in mitochondrial β-oxidation disorders.

biomarkers inborn errors lipid metabolism lipid metabolism disorders lipidomics lipolysis and fatty acids lysophospholipids mitochondria

Journal

FASEB journal : official publication of the Federation of American Societies for Experimental Biology
ISSN: 1530-6860
Titre abrégé: FASEB J
Pays: United States
ID NLM: 8804484

Informations de publication

Date de publication:
29 Feb 2024
Historique:
revised: 05 01 2024
received: 23 10 2023
accepted: 26 01 2024
medline: 19 2 2024
pubmed: 19 2 2024
entrez: 19 2 2024
Statut: ppublish

Résumé

Carnitine derivatives of disease-specific acyl-CoAs are the diagnostic hallmark for long-chain fatty acid β-oxidation disorders (lcFAOD), including carnitine shuttle deficiencies, very-long-chain acyl-CoA dehydrogenase deficiency (VLCADD), long-chain 3-hydroxyacyl-CoA dehydrogenase deficiency (LCHADD) and mitochondrial trifunctional protein deficiency (MPTD). The exact consequence of accumulating lcFAO-intermediates and their influence on cellular lipid homeostasis is, however, still unknown. To investigate the fate and cellular effects of the accumulating lcFAO-intermediates and to explore the presence of disease-specific markers, we used tracer-based lipidomics with deuterium-labeled oleic acid (D9-C18:1) in lcFAOD patient-derived fibroblasts. In line with previous studies, we observed a trend towards neutral lipid accumulation in lcFAOD. In addition, we detected a direct connection between the chain length and patterns of (un)saturation of accumulating acylcarnitines and the various enzyme deficiencies. Our results also identified two disease-specific candidate biomarkers. Lysophosphatidylcholine(14:1) (LPC(14:1)) was specifically increased in severe VLCADD compared to mild VLCADD and control samples. This was confirmed in plasma samples showing an inverse correlation with enzyme activity, which was better than the classic diagnostic marker C14:1-carnitine. The second candidate biomarker was an unknown lipid class, which we identified as S-(3-hydroxyacyl)cysteamines. We hypothesized that these were degradation products of the CoA moiety of accumulating 3-hydroxyacyl-CoAs. S-(3-hydroxyacyl)cysteamines were significantly increased in LCHADD compared to controls and other lcFAOD, including MTPD. Our findings suggest extensive alternative lipid metabolism in lcFAOD and confirm that lcFAOD accumulate neutral lipid species. In addition, we present two disease-specific candidate biomarkers for VLCADD and LCHADD, that may have significant relevance for disease diagnosis, prognosis, and monitoring.

Identifiants

pubmed: 38372965
doi: 10.1096/fj.202302163R
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e23478

Subventions

Organisme : Metakids/PNO Zorg
ID : 2019_087
Organisme : Independent Research Fund Denmark
ID : 1057-00039B
Organisme : NWO
ID : 91118006

Informations de copyright

© 2024 The Authors. The FASEB Journal published by Wiley Periodicals LLC on behalf of Federation of American Societies for Experimental Biology.

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Auteurs

Marit Schwantje (M)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Department of Metabolic Diseases, Wilhelmina Children's Hospital, University Medical Center Utrecht, Utrecht, the Netherlands.

Signe Mosegaard (S)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.
Amsterdam Cardiovascular Sciences, Amsterdam, the Netherlands.
Emma Center for Personalized Medicine, Amsterdam UMC, Amsterdam, the Netherlands.

Suzan J G Knottnerus (SJG)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.

Jan Bert van Klinken (JB)

Core Facility Metabolomics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Department of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands.

Ronald J Wanders (RJ)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.

Henk van Lenthe (H)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.

Jill Hermans (J)

Core Facility Metabolomics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.

Lodewijk IJlst (L)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.

Simone W Denis (SW)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.

Yorrick R J Jaspers (YRJ)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Core Facility Metabolomics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.

Sabine A Fuchs (SA)

Department of Metabolic Diseases, Wilhelmina Children's Hospital, University Medical Center Utrecht, Utrecht, the Netherlands.

Riekelt H Houtkooper (RH)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.
Amsterdam Cardiovascular Sciences, Amsterdam, the Netherlands.
Emma Center for Personalized Medicine, Amsterdam UMC, Amsterdam, the Netherlands.

Sacha Ferdinandusse (S)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.

Frédéric M Vaz (FM)

Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.
Amsterdam Gastroenterology, Endocrinology, and Metabolism, Amsterdam, the Netherlands.
Emma Center for Personalized Medicine, Amsterdam UMC, Amsterdam, the Netherlands.
Core Facility Metabolomics, Amsterdam UMC, University of Amsterdam, Amsterdam, the Netherlands.

Classifications MeSH