CDBProm: the Comprehensive Directory of Bacterial Promoters.

Journal

NAR genomics and bioinformatics
ISSN: 2631-9268
Titre abrégé: NAR Genom Bioinform
Pays: England
ID NLM: 101756213

Informations de publication

Date de publication:
Mar 2024
Historique:
received: 12 09 2023
revised: 12 01 2024
accepted: 29 01 2024
medline: 22 2 2024
pubmed: 22 2 2024
entrez: 22 2 2024
Statut: epublish

Résumé

The decreasing cost of whole genome sequencing has produced high volumes of genomic information that require annotation. The experimental identification of promoter sequences, pivotal for regulating gene expression, is a laborious and cost-prohibitive task. To expedite this, we introduce the Comprehensive Directory of Bacterial Promoters (CDBProm), a directory of

Identifiants

DOI: 10.1093/nargab/lqae018 PMID: 38385146 PMC: PMC10880602
pubmed: 38385146
doi: 10.1093/nargab/lqae018
pii: lqae018
pmc: PMC10880602
doi:

Types de publication

Journal Article

Langues

eng

Pagination

lqae018

Informations de copyright

© The Author(s) 2024. Published by Oxford University Press on behalf of NAR Genomics and Bioinformatics.

Auteurs

Gustavo Sganzerla Martinez (GS)

Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3H 4H7, Canada.
Pediatrics, Izaak Walton Killam (IWK) Health Center. Canadian Center for Vaccinology (CCfV), Halifax, Nova Scotia B3H 4H7, Canada.
BioForge Canada Limited, Halifax, Nova Scotia B3N 3B9, Canada.
ORCID: 0000-0002-7656-0579

Ernesto Perez-Rueda (E)

Instituto de Investigaciones en Matemáticas Aplicadas y en Sistemas, Universidad Nacional Autonóma de México, Unidad Académica del Estado de Yucatán, Mérida 97302, Yucatán, Mexico.
ORCID: 0000-0002-6879-0673

Anuj Kumar (A)

Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3H 4H7, Canada.
Pediatrics, Izaak Walton Killam (IWK) Health Center. Canadian Center for Vaccinology (CCfV), Halifax, Nova Scotia B3H 4H7, Canada.
BioForge Canada Limited, Halifax, Nova Scotia B3N 3B9, Canada.
ORCID: 0000-0002-5023-7618

Mansi Dutt (M)

Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3H 4H7, Canada.
Pediatrics, Izaak Walton Killam (IWK) Health Center. Canadian Center for Vaccinology (CCfV), Halifax, Nova Scotia B3H 4H7, Canada.
BioForge Canada Limited, Halifax, Nova Scotia B3N 3B9, Canada.
ORCID: 0000-0002-4026-5498

Cinthia Rodríguez Maya (CR)

Facultad de Ciencias e Ingeniería, Universidad Nacional Autonoma de Mexico, Mexico City 04510, Mexico.
ORCID: 0000-0002-4887-3332

Leonardo Ledesma-Dominguez (L)

Instituto de Investigaciones en Matematicas Aplicadas y en Sistemas, Universidad Nacional Autonoma de Mexico, Mexico City 04510, Mexico.
ORCID: 0000-0002-5374-3954

Pedro Lenz Casa (PL)

Biotechnology Institute, Universidade de Caxias do Sul, Caxias do Sul, Rio Grande do Sul 95070-560, Brazil.
ORCID: 0000-0002-4666-9434

Aditya Kumar (A)

Molecular Biology and Biotechnology, Tezpur University, Tezpur, Assam 784028, India.
ORCID: 0000-0002-6474-8830

Scheila de Avila E Silva (S)

Biotechnology Institute, Universidade de Caxias do Sul, Caxias do Sul, Rio Grande do Sul 95070-560, Brazil.
ORCID: 0000-0002-3472-3907

David J Kelvin (DJ)

Microbiology and Immunology, Dalhousie University, Halifax, Nova Scotia B3H 4H7, Canada.
Pediatrics, Izaak Walton Killam (IWK) Health Center. Canadian Center for Vaccinology (CCfV), Halifax, Nova Scotia B3H 4H7, Canada.
BioForge Canada Limited, Halifax, Nova Scotia B3N 3B9, Canada.
ORCID: 0000-0001-7757-9493

Classifications MeSH