The potato rhizosphere microbiota correlated to the yield of three different regions in Korea.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
24 Feb 2024
Historique:
received: 19 12 2023
accepted: 21 02 2024
medline: 25 2 2024
pubmed: 25 2 2024
entrez: 24 2 2024
Statut: epublish

Résumé

We examined potato rhizosphere bacterial and fungal communities across three regions: Cheongju, Pyeongchang, and Gangneung. These regions have varying soil and climate conditions, resulting in different yields. We found that precipitation was the main limiting factor in our study while soil physiochemical factors affect bacterial and fungal microbiota in correlation with yield. Both bacterial and fungal microbiota showed distinct patterns according to the regions. ASVs positively correlated with yield were predominantly found in the Pyeongchang region which also produced the highest yields, while ASVs negatively correlated with yield were associated with Gangneung where the lowest yields were observed. The greatest bacterial and fungal diversity was detected in Pyeongchang consisting of Propionibacteriales, Burkholderiales, and Vicinamibacteriales. Gangneung, on the other hand primarily belong to Sordariales, Mortierellales, Cystofilobasidiales, and Tremellales. The putative yield-negative ASVs detected in Gangneung may have been influenced by drought stress. This work has highlighted key bacterial and fungal taxa as well as core taxa that may potentially be associated with high and low yields of potato in relation to metadata which includes soil chemical and physical parameters as well as weather data. Taken together we suggest that this information can be used to assess site suitability for potato production.

Identifiants

pubmed: 38402369
doi: 10.1038/s41598-024-55263-7
pii: 10.1038/s41598-024-55263-7
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

4536

Subventions

Organisme : Rural Development Administration, Republic of Korea
ID : PJ014866032021
Organisme : Biotechnology and Biological Sciences Research Council,United Kingdom
ID : BB/X010953/1

Informations de copyright

© 2024. The Author(s).

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Auteurs

Gye-Ryeong Bak (GR)

Highland Agriculture Research Institute, National Institute of Crop Science, Rural Development Administration, Pyeongchang, 25342, Republic of Korea.
Interdisciplinary Programs in Agricultural Genomics, Seoul National University, Seoul, 08826, Republic of Korea.

Kiseok Keith Lee (KK)

Department of Ecology and Evolution, The University of Chicago, 1101 East 57th Street, Chicago, IL, 60637, USA.

Ian M Clark (IM)

Sustainable Agriculture Sciences, Rothamsted Research, Harpenden, AL5 2JQ, Hertfordshire, UK.

Tim H Mauchline (TH)

Sustainable Agriculture Sciences, Rothamsted Research, Harpenden, AL5 2JQ, Hertfordshire, UK.

Vanessa Nessner Kavamura (VN)

Sustainable Agriculture Sciences, Rothamsted Research, Harpenden, AL5 2JQ, Hertfordshire, UK.

George Lund (G)

Sustainable Agriculture Sciences, Rothamsted Research, Harpenden, AL5 2JQ, Hertfordshire, UK.

Samnyu Jee (S)

Highland Agriculture Research Institute, National Institute of Crop Science, Rural Development Administration, Pyeongchang, 25342, Republic of Korea.

Jeong-Tae Lee (JT)

Highland Agriculture Research Institute, National Institute of Crop Science, Rural Development Administration, Pyeongchang, 25342, Republic of Korea.

Hyun Kim (H)

Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea. kh0219@snu.ac.kr.
Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea. kh0219@snu.ac.kr.

Yong-Hwan Lee (YH)

Interdisciplinary Programs in Agricultural Genomics, Seoul National University, Seoul, 08826, Republic of Korea. yonglee@snu.ac.kr.
Department of Agricultural Biotechnology, Seoul National University, Seoul, 08826, Republic of Korea. yonglee@snu.ac.kr.
Research Institute of Agriculture and Life Sciences, Seoul National University, Seoul, 08826, Republic of Korea. yonglee@snu.ac.kr.
Center for Plant Microbiome Research, Seoul National University, Seoul, 08826, Republic of Korea. yonglee@snu.ac.kr.
Plant Immunity Research Center, Seoul National University, Seoul, 08826, Republic of Korea. yonglee@snu.ac.kr.
Plant Genomics and Breeding Institute, Seoul National University, Seoul, 08826, Republic of Korea. yonglee@snu.ac.kr.

Classifications MeSH