A type III polyketide synthase cluster in the phylum Planctomycetota is involved in alkylresorcinol biosynthesis.

Chemical mediators Corynebacterium glutamicum Hierridin Planctomycetes Polyketide-derived compounds

Journal

Applied microbiology and biotechnology
ISSN: 1432-0614
Titre abrégé: Appl Microbiol Biotechnol
Pays: Germany
ID NLM: 8406612

Informations de publication

Date de publication:
26 Feb 2024
Historique:
received: 21 11 2023
accepted: 08 02 2024
revised: 29 01 2024
medline: 26 2 2024
pubmed: 26 2 2024
entrez: 26 2 2024
Statut: epublish

Résumé

Members of the bacterial phylum Planctomycetota have recently emerged as promising and for the most part untapped sources of novel bioactive compounds. The characterization of more than 100 novel species in the last decade stimulated recent bioprospection studies that start to unveil the chemical repertoire of the phylum. In this study, we performed systematic bioinformatic analyses based on the genomes of all 131 described members of the current phylum focusing on the identification of type III polyketide synthase (PKS) genes. Type III PKSs are versatile enzymes involved in the biosynthesis of a wide array of structurally diverse natural products with potent biological activities. We identified 96 putative type III PKS genes of which 58 are encoded in an operon with genes encoding a putative oxidoreductase and a methyltransferase. Sequence similarities on protein level and the genetic organization of the operon point towards a functional link to the structurally related hierridins recently discovered in picocyanobacteria. The heterologous expression of planctomycetal type III PKS genes from strains belonging to different families in an engineered Corynebacterium glutamicum strain led to the biosynthesis of pentadecyl- and heptadecylresorcinols. Phenotypic assays performed with the heterologous producer strains and a constructed type III PKS gene deletion mutant suggest that the natural function of the identified compounds differs from that confirmed in other bacterial alkylresorcinol producers. KEY POINTS: • Planctomycetal type III polyketide synthases synthesize long-chain alkylresorcinols. • Phylogenetic analyses suggest an ecological link to picocyanobacterial hierridins. • Engineered C. glutamicum is suitable for an expression of planctomycete-derived genes.

Identifiants

pubmed: 38407604
doi: 10.1007/s00253-024-13065-x
pii: 10.1007/s00253-024-13065-x
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

239

Subventions

Organisme : Deutsche Forschungsgemeinschaft
ID : 239748522
Organisme : Deutsche Forschungsgemeinschaft
ID : 239748522
Organisme : HORIZON EUROPE European Research Council
ID : 802736
Organisme : HORIZON EUROPE European Research Council
ID : 802736

Informations de copyright

© 2024. The Author(s).

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Auteurs

Lars Milke (L)

Institute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich, 52425, Jülich, Germany.

Moses Kabuu (M)

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, 07743, Jena, Germany.

Renè Zschoche (R)

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, 07743, Jena, Germany.

Jochem Gätgens (J)

Institute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich, 52425, Jülich, Germany.

Karin Krumbach (K)

Institute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich, 52425, Jülich, Germany.

Kim-Loreen Carlstedt (KL)

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, 07743, Jena, Germany.

Carmen E Wurzbacher (CE)

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, 07743, Jena, Germany.

Sven Balluff (S)

Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), 66123, Saarbrücken, Germany.

Christine Beemelmanns (C)

Helmholtz Institute for Pharmaceutical Research Saarland (HIPS), 66123, Saarbrücken, Germany.
Saarland University, Saarbrücken, Germany.

Christian Jogler (C)

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, 07743, Jena, Germany.

Jan Marienhagen (J)

Institute of Bio- and Geosciences, IBG-1: Biotechnology, Forschungszentrum Jülich, 52425, Jülich, Germany.
Institute of Biotechnology, RWTH Aachen University, Worringer Weg 3, 52074, Aachen, Germany.

Nicolai Kallscheuer (N)

Department of Microbial Interactions, Institute for Microbiology, Friedrich Schiller University, 07743, Jena, Germany. nicolai.kallscheuer@uni-jena.de.

Classifications MeSH