IcoConv : Explainable brain cortical surface analysis for ASD classification.

ASD Shape Analysis brain

Journal

Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.)
Titre abrégé: Shape Med Imaging (2023)
Pays: Switzerland
ID NLM: 9918750588806676

Informations de publication

Date de publication:
Oct 2023
Historique:
medline: 1 3 2024
pubmed: 1 3 2024
entrez: 1 3 2024
Statut: ppublish

Résumé

In this study, we introduce a novel approach for the analysis and interpretation of 3D shapes, particularly applied in the context of neuroscientific research. Our method captures 2D perspectives from various vantage points of a 3D object. These perspectives are subsequently analyzed using 2D Convolutional Neural Networks (CNNs), uniquely modified with custom pooling mechanisms. We sought to assess the efficacy of our approach through a binary classification task involving subjects at high risk for Autism Spectrum Disorder (ASD). The task entailed differentiating between high-risk positive and high-risk negative ASD cases. To do this, we employed brain attributes like cortical thickness, surface area, and extra-axial cerebral spinal measurements. We then mapped these measurements onto the surface of a sphere and subsequently analyzed them via our bespoke method. One distinguishing feature of our method is the pooling of data from diverse views using our icosahedron convolution operator. This operator facilitates the efficient sharing of information between neighboring views. A significant contribution of our method is the generation of gradient-based explainability maps, which can be visualized on the brain surface. The insights derived from these explainability images align with prior research findings, particularly those detailing the brain regions typically impacted by ASD. Our innovative approach thereby substantiates the known understanding of this disorder while potentially unveiling novel areas of study.

Identifiants

pubmed: 38425723
doi: 10.1007/978-3-031-46914-5_20
pmc: PMC10902712
doi:

Types de publication

Journal Article

Langues

eng

Pagination

248-258

Auteurs

Ugo Rodriguez (U)

University of North Carolina, Chapel Hill, NC.

Tahya Deddah (T)

University of North Carolina, Chapel Hill, NC.

Sun Hyung Kim (SH)

University of North Carolina, Chapel Hill, NC.

Mark Shen (M)

University of North Carolina, Chapel Hill, NC.

Kelly N Botteron (KN)

Washington University in St. Louis, St. Louis, MO.

D Louis Collins (D)

McGill University, Montréal, Québec.

Stephen R Dager (SR)

University of Washington, Seattle, WA.

Annette M Estes (AM)

University of Washington, Seattle, WA.

Alan C Evans (AC)

McGill University, Montréal, Québec.

Heather C Hazlett (HC)

University of North Carolina, Chapel Hill, NC.

Robert McKinstry (R)

Washington University in St. Louis, St. Louis, MO.

Robert T Shultz (RT)

Children's Hospital of Philadelphia, Philadelphia, PA.

Joseph Piven (J)

University of North Carolina, Chapel Hill, NC.

Quyen Dang (Q)

University of North Carolina, Chapel Hill, NC.

Martin Styner (M)

University of North Carolina, Chapel Hill, NC.

Juan Carlos Prieto (JC)

University of North Carolina, Chapel Hill, NC.

Classifications MeSH