A metagenomic investigation of phytoplasma diversity in Australian vegetable growing regions.

ANI Candidatus Phytoplasma australasiaticum Candidatus Phytoplasma stylosanthis draft genomes metagenomic assembled genomes (MAGs) unclassified phytoplasmas

Journal

Microbial genomics
ISSN: 2057-5858
Titre abrégé: Microb Genom
Pays: England
ID NLM: 101671820

Informations de publication

Date de publication:
Mar 2024
Historique:
medline: 6 3 2024
pubmed: 6 3 2024
entrez: 6 3 2024
Statut: ppublish

Résumé

In this study, metagenomic sequence data was used to investigate the phytoplasma taxonomic diversity in vegetable-growing regions across Australia. Metagenomic sequencing was performed on 195 phytoplasma-positive samples, originating either from historic collections (

Identifiants

DOI: 10.1099/mgen.0.001213 PMID: 38446015
pubmed: 38446015
doi: 10.1099/mgen.0.001213
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Bianca Rodrigues Jardim (B)

School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, Australia.
Agriculture Victoria Research, Department of Energy, Environment and Climate Action, AgriBio, Bundoora, Victoria, Australia.

Cherie Gambley (C)

Horticulture and Forestry Science, Department of Agriculture and Fisheries Maroochy Research Facility, Nambour, Queensland, Australia.

Lucy T T Tran-Nguyen (LTT)

Plant Health Australia, Deakin, Australian Capital Territory, Australia.

Craig Webster (C)

Diagnostic Laboratory Services, Department of Primary Industries and Regional Development, South Perth, Western Australia, Australia.

Monica Kehoe (M)

Diagnostic Laboratory Services, Department of Primary Industries and Regional Development, South Perth, Western Australia, Australia.

Wycliff M Kinoti (WM)

Agriculture Victoria Research, Department of Energy, Environment and Climate Action, AgriBio, Bundoora, Victoria, Australia.

Samantha Bond (S)

Biosecurity and Animal Welfare, Department of Industry, Tourism and Trade, Darwin, Northern Territory, Australia.

Richard Davis (R)

Northern Australia Quarantine Strategy, Department of Agriculture, Fisheries and Forestry, Canberra, Australian Capital Territory, 2601, Australia.

Lynne Jones (L)

Northern Australia Quarantine Strategy, Department of Agriculture, Fisheries and Forestry, Canberra, Australian Capital Territory, 2601, Australia.

Nandita Pathania (N)

Department of Agriculture and Fisheries, Mareeba, Queensland, Australia.

Murray Sharman (M)

Department of Agriculture and Fisheries, Ecosciences Precinct, Dutton Park, Queensland 4102, Australia.

Toni Chapman (T)

Biosecurity and Food Safety, New South Wales Department of Primary Industries, Elizabeth Macarthur Agricultural Institute (EMAI), Menangle, New South Wales, 2567, Australia.

Brendan C Rodoni (BC)

School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, Australia.
Agriculture Victoria Research, Department of Energy, Environment and Climate Action, AgriBio, Bundoora, Victoria, Australia.

Fiona E Constable (FE)

School of Applied Systems Biology, La Trobe University, Bundoora, Victoria, Australia.
Agriculture Victoria Research, Department of Energy, Environment and Climate Action, AgriBio, Bundoora, Victoria, Australia.

Classifications MeSH