Synthesizing Contrast-Enhanced MR Images from Noncontrast MR Images Using Deep Learning.


Journal

AJNR. American journal of neuroradiology
ISSN: 1936-959X
Titre abrégé: AJNR Am J Neuroradiol
Pays: United States
ID NLM: 8003708

Informations de publication

Date de publication:
07 Mar 2024
Historique:
received: 27 01 2022
accepted: 01 12 2023
medline: 8 3 2024
pubmed: 8 3 2024
entrez: 7 3 2024
Statut: epublish

Résumé

Recent developments in deep learning methods offer a potential solution to the need for alternative imaging methods due to concerns about the toxicity of gadolinium-based contrast agents. The purpose of the study was to synthesize virtual gadolinium contrast-enhanced T1-weighted MR images from noncontrast multiparametric MR images in patients with primary brain tumors by using deep learning. We trained and validated a deep learning network by using MR images from 335 subjects in the Brain Tumor Segmentation Challenge 2019 training data set. A held out set of 125 subjects from the Brain Tumor Segmentation Challenge 2019 validation data set was used to test the generalization of the model. A residual inception DenseNet network, called T1c-ET, was developed and trained to simultaneously synthesize virtual contrast-enhanced T1-weighted (vT1c) images and segment the enhancing portions of the tumor. Three expert neuroradiologists independently scored the synthesized vT1c images by using a 3-point Likert scale, evaluating image quality and contrast enhancement against ground truth T1c images (1 = poor, 2 = good, 3 = excellent). The synthesized vT1c images achieved structural similarity index, peak signal-to-noise ratio, and normalized mean square error scores of 0.91, 64.35, and 0.03, respectively. There was moderate interobserver agreement between the 3 raters, regarding the algorithm's performance in predicting contrast enhancement, with a Fleiss kappa value of 0.61. Our model was able to accurately predict contrast enhancement in 88.8% of the cases (scores of 2 to 3 on the 3-point scale). We developed a novel deep learning architecture to synthesize virtual postcontrast enhancement by using only conventional noncontrast brain MR images. Our results demonstrate the potential of deep learning methods to reduce the need for gadolinium contrast in the evaluation of primary brain tumors.

Sections du résumé

BACKGROUND AND PURPOSE OBJECTIVE
Recent developments in deep learning methods offer a potential solution to the need for alternative imaging methods due to concerns about the toxicity of gadolinium-based contrast agents. The purpose of the study was to synthesize virtual gadolinium contrast-enhanced T1-weighted MR images from noncontrast multiparametric MR images in patients with primary brain tumors by using deep learning.
MATERIALS AND METHODS METHODS
We trained and validated a deep learning network by using MR images from 335 subjects in the Brain Tumor Segmentation Challenge 2019 training data set. A held out set of 125 subjects from the Brain Tumor Segmentation Challenge 2019 validation data set was used to test the generalization of the model. A residual inception DenseNet network, called T1c-ET, was developed and trained to simultaneously synthesize virtual contrast-enhanced T1-weighted (vT1c) images and segment the enhancing portions of the tumor. Three expert neuroradiologists independently scored the synthesized vT1c images by using a 3-point Likert scale, evaluating image quality and contrast enhancement against ground truth T1c images (1 = poor, 2 = good, 3 = excellent).
RESULTS RESULTS
The synthesized vT1c images achieved structural similarity index, peak signal-to-noise ratio, and normalized mean square error scores of 0.91, 64.35, and 0.03, respectively. There was moderate interobserver agreement between the 3 raters, regarding the algorithm's performance in predicting contrast enhancement, with a Fleiss kappa value of 0.61. Our model was able to accurately predict contrast enhancement in 88.8% of the cases (scores of 2 to 3 on the 3-point scale).
CONCLUSIONS CONCLUSIONS
We developed a novel deep learning architecture to synthesize virtual postcontrast enhancement by using only conventional noncontrast brain MR images. Our results demonstrate the potential of deep learning methods to reduce the need for gadolinium contrast in the evaluation of primary brain tumors.

Identifiants

pubmed: 38453408
pii: 45/3/312
doi: 10.3174/ajnr.A8107
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

312-319

Informations de copyright

© 2024 by American Journal of Neuroradiology.

Auteurs

Gowtham Murugesan (G)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Fang F Yu (FF)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas frankf.yu@utsouthwestern.edu.

Michael Achilleos (M)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

John DeBevits (J)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Sahil Nalawade (S)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Chandan Ganesh (C)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Ben Wagner (B)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Ananth J Madhuranthakam (AJ)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Joseph A Maldjian (JA)

Department of Radiology, University of Texas Southwestern Medical Center, Dallas, Texas.

Classifications MeSH