Estimating household contact matrices structure from easily collectable metadata.


Journal

PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081

Informations de publication

Date de publication:
2024
Historique:
received: 31 10 2023
accepted: 18 12 2023
medline: 18 3 2024
pubmed: 14 3 2024
entrez: 14 3 2024
Statut: epublish

Résumé

Contact matrices are a commonly adopted data representation, used to develop compartmental models for epidemic spreading, accounting for the contact heterogeneities across age groups. Their estimation, however, is generally time and effort consuming and model-driven strategies to quantify the contacts are often needed. In this article we focus on household contact matrices, describing the contacts among the members of a family and develop a parametric model to describe them. This model combines demographic and easily quantifiable survey-based data and is tested on high resolution proximity data collected in two sites in South Africa. Given its simplicity and interpretability, we expect our method to be easily applied to other contexts as well and we identify relevant questions that need to be addressed during the data collection procedure.

Identifiants

pubmed: 38483886
doi: 10.1371/journal.pone.0296810
pii: PONE-D-23-33290
pmc: PMC10939291
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e0296810

Informations de copyright

Copyright: © 2024 Dall’Amico et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.

Déclaration de conflit d'intérêts

CCo has received grant support from Sanofi Pasteur, US CDC, Welcome Trust, Programme for Applied Technologies in Health (PATH), Bill & Melinda Gates Foundation and South African Medical Research Council (SA-MRC). NW reports receiving grants from Sanofi Pasteur, US CDC and the Bill & Melinda Gates Foundation. This does not alter our adherence to PLOS ONE policies on sharing data and materials. All other authors do not report any competing interests.

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Auteurs

Jackie Kleynhans (J)

National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.
School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.

Laetitia Gauvin (L)

ISI Foundation, Turin, Italy.
Institute for Research on sustainable Development, UMR215 PRODIG, Aubervilliers, France.

Michele Tizzoni (M)

ISI Foundation, Turin, Italy.
Department of Sociology and Social Research, University of Trento, Trento, Italy.

Laura Ozella (L)

ISI Foundation, Turin, Italy.

Mvuyo Makhasi (M)

National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.

Nicole Wolter (N)

National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.
School of Pathology, University of the Witwatersrand, Johannesburg, South Africa.

Brigitte Language (B)

Unit for Environmental Science and Management, Climatology Research Group, North-West University, Potchefstroom, South Africa.

Ryan G Wagner (RG)

MRC/Wits Rural Public Health and Health Transitions Research Unit (Agincourt), Agincourt, South Africa.

Cheryl Cohen (C)

National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.
School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.

Stefano Tempia (S)

National Institute for Communicable Diseases of the National Health Laboratory Service, Johannesburg, South Africa.
School of Public Health, Faculty of Health Sciences, University of the Witwatersrand, Johannesburg, South Africa.

Ciro Cattuto (C)

ISI Foundation, Turin, Italy.
Department of Informatics, University of Turin, Turin, Italy.

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Classifications MeSH