Structural insights into thermophilic chaperonin complexes.

GroELS chaperonin cryo-EM cryogenic electron microscopy hydrogen-oxidizing bacteria molecular chaperone single particle analysis thermophilic bacteria

Journal

Structure (London, England : 1993)
ISSN: 1878-4186
Titre abrégé: Structure
Pays: United States
ID NLM: 101087697

Informations de publication

Date de publication:
06 Mar 2024
Historique:
received: 02 11 2023
revised: 07 02 2024
accepted: 20 02 2024
medline: 17 3 2024
pubmed: 17 3 2024
entrez: 16 3 2024
Statut: aheadofprint

Résumé

Group I chaperonins are dual heptamer protein complexes that play significant roles in protein homeostasis. The structure and function of the Escherichia coli chaperonin are well characterized. However, the dynamic properties of chaperonins, such as large ATPase-dependent conformational changes by binding of lid-like co-chaperonin GroES, have made structural analyses challenging, and our understanding of these changes during the turnover of chaperonin complex formation is limited. In this study, we used single-particle cryogenic electron microscopy to investigate the structures of GroES-bound chaperonin complexes from the thermophilic hydrogen-oxidizing bacteria Hydrogenophilus thermoluteolus and Hydrogenobacter thermophilus in the presence of ATP and AMP-PNP. We captured the structure of an intermediate state chaperonin complex, designated as an asymmetric football-shaped complex, and performed analyses to decipher the dynamic structural variations. Our structural analyses of inter- and intra-subunit communications revealed a unique mechanism of complex formation through the binding of a second GroES to a bullet-shaped complex.

Identifiants

pubmed: 38492570
pii: S0969-2126(24)00051-0
doi: 10.1016/j.str.2024.02.012
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

Copyright © 2024 Elsevier Ltd. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of interests All authors declare no conflict of interest.

Auteurs

Zengwei Liao (Z)

Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan.

Chai C Gopalasingam (CC)

Life Science Research Infrastructure Group, RIKEN SPring-8 Center, Kouto, Sayo, Hyogo 1-1-1, Japan.

Masafumi Kameya (M)

Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan.

Christoph Gerle (C)

Life Science Research Infrastructure Group, RIKEN SPring-8 Center, Kouto, Sayo, Hyogo 1-1-1, Japan.

Hideki Shigematsu (H)

Structural Biology Division, Japan Synchrotron Radiation Research Institute, SPring-8, Sayo, Hyogo, Japan.

Masaharu Ishii (M)

Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan.

Takatoshi Arakawa (T)

Faculty of Pharmaceutical Sciences, Tokyo University of Science, Noda, Chiba 278-8510, Japan. Electronic address: arakawa@rs.tus.ac.jp.

Shinya Fushinobu (S)

Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan; Collaborative Research Institute for Innovative Microbiology, The University of Tokyo, Bunkyo City, Tokyo 113-8654, Japan. Electronic address: asfushi@mail.ecc.u-tokyo.ac.jp.

Classifications MeSH