On the origin of optical rotation changes during the κ-carrageenan disorder-to-order transition.

Carrageenan Density-functional theory Machine learning Molecular dynamics Optical rotation

Journal

Carbohydrate polymers
ISSN: 1879-1344
Titre abrégé: Carbohydr Polym
Pays: England
ID NLM: 8307156

Informations de publication

Date de publication:
01 Jun 2024
Historique:
received: 10 12 2023
revised: 08 02 2024
accepted: 20 02 2024
medline: 18 3 2024
pubmed: 18 3 2024
entrez: 17 3 2024
Statut: ppublish

Résumé

It is well established that solutions of both polymeric and oligomeric κ-carrageenan exhibit a clear change in optical rotation (OR), in concert with gel-formation for polymeric samples, as the solution is cooled in the presence of certain ions. The canonical interpretation - that this OR change reflects a 'coil-to-helix transition' in single chains - has seemed unambiguous; the solution- or 'disordered'-state structure has ubiquitously been assumed to be a 'random coil', and the helical nature of carrageenan in the solid-state was settled in the 1970s. However, recent work has found that κ-carrageenan contains substantial helical secondary structure elements in the disordered-state, raising doubts over the validity of this interpretation. To investigate the origins of the OR, density-functional theory calculations were conducted using atomic models of κ-carrageenan oligomers. Changes were found to occur in the predicted OR owing purely to dimerization of chains, and - together with the additional effects of slight changes in conformation that occur when separated helical chains form double-helices - the predicted OR changes are qualitatively consistent with experimental results. These findings contribute to a growing body of evidence that the carrageenan 'disorder-to-order' transition is a cooperative process, and have further implications for the interpretation of OR changes demonstrated by macromolecules in general.

Identifiants

pubmed: 38494229
pii: S0144-8617(24)00201-7
doi: 10.1016/j.carbpol.2024.121975
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

121975

Informations de copyright

Copyright © 2024 The Author(s). Published by Elsevier Ltd.. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

B P Westberry (BP)

School of Natural Sciences, Massey University, Palmerston North, New Zealand; MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand; Fonterra Research and Development Centre, Private Bag 11029, Dairy Farm Road, Palmerston North, New Zealand. Electronic address: ben.westberry@fonterra.com.

M Rio (M)

National Institute of Water and Atmospheric Research (NIWA), Wellington, New Zealand; Science Infrastructure (NeSI), Auckland, New Zealand.

M R Waterland (MR)

School of Natural Sciences, Massey University, Palmerston North, New Zealand; MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.

M A K Williams (MAK)

School of Natural Sciences, Massey University, Palmerston North, New Zealand; MacDiarmid Institute for Advanced Materials and Nanotechnology, Wellington, New Zealand.

Classifications MeSH