Domain generalization across tumor types, laboratories, and species - Insights from the 2022 edition of the Mitosis Domain Generalization Challenge.

Challenge Deep Learning Domain generalization Histopathology Mitosis

Journal

Medical image analysis
ISSN: 1361-8423
Titre abrégé: Med Image Anal
Pays: Netherlands
ID NLM: 9713490

Informations de publication

Date de publication:
22 Mar 2024
Historique:
received: 27 09 2023
revised: 19 01 2024
accepted: 20 03 2024
medline: 28 3 2024
pubmed: 28 3 2024
entrez: 27 3 2024
Statut: aheadofprint

Résumé

Recognition of mitotic figures in histologic tumor specimens is highly relevant to patient outcome assessment. This task is challenging for algorithms and human experts alike, with deterioration of algorithmic performance under shifts in image representations. Considerable covariate shifts occur when assessment is performed on different tumor types, images are acquired using different digitization devices, or specimens are produced in different laboratories. This observation motivated the inception of the 2022 challenge on MItosis Domain Generalization (MIDOG 2022). The challenge provided annotated histologic tumor images from six different domains and evaluated the algorithmic approaches for mitotic figure detection provided by nine challenge participants on ten independent domains. Ground truth for mitotic figure detection was established in two ways: a three-expert majority vote and an independent, immunohistochemistry-assisted set of labels. This work represents an overview of the challenge tasks, the algorithmic strategies employed by the participants, and potential factors contributing to their success. With an F

Identifiants

pubmed: 38537415
pii: S1361-8415(24)00080-X
doi: 10.1016/j.media.2024.103155
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

103155

Informations de copyright

Copyright © 2024 The Author(s). Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Marc Aubreville (M)

Technische Hochschule Ingolstadt, Ingolstadt, Germany. Electronic address: marc@deepmicroscopy.org.

Nikolas Stathonikos (N)

Pathology Department, UMC Utrecht, The Netherlands.

Taryn A Donovan (TA)

Department of Anatomic Pathology, The Schwarzman Animal Medical Center, NY, USA.

Robert Klopfleisch (R)

Institute of Veterinary Pathology, Freie Universität Berlin, Berlin, Germany.

Jonas Ammeling (J)

Technische Hochschule Ingolstadt, Ingolstadt, Germany.

Jonathan Ganz (J)

Technische Hochschule Ingolstadt, Ingolstadt, Germany.

Frauke Wilm (F)

Pattern Recognition Lab, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany; Department Artificial Intelligence in Biomedical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.

Mitko Veta (M)

Computational Pathology Group, Radboud UMC Nijmegen, The Netherlands.

Samir Jabari (S)

Institute of Neuropathology, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.

Markus Eckstein (M)

Institute of Pathology, University Hospital Erlangen, Friedrich-Alexander-Universität Erlangen-Nünberg, Erlangen, Germany.

Jonas Annuscheit (J)

University of Applied Sciences (HTW) Berlin, Berlin, Germany.

Christian Krumnow (C)

University of Applied Sciences (HTW) Berlin, Berlin, Germany.

Engin Bozaba (E)

Artificial Intelligence Research Team, Virasoft Corporation, NY, USA.

Sercan Çayır (S)

Artificial Intelligence Research Team, Virasoft Corporation, NY, USA.

Hongyan Gu (H)

University of California, Los Angeles, USA.

Xiang 'Anthony' Chen (X')

University of California, Los Angeles, USA.

Mostafa Jahanifar (M)

University of Warwick, United Kingdom.

Adam Shephard (A)

University of Warwick, United Kingdom.

Satoshi Kondo (S)

Muroran Institute of Technology, Muroran, Japan.

Satoshi Kasai (S)

Niigata University of Health and Welfare, Niigata, Japan.

Sujatha Kotte (S)

TCS Research, Tata Consultancy Services Ltd, Hyderabad, India.

V G Saipradeep (VG)

TCS Research, Tata Consultancy Services Ltd, Hyderabad, India.

Maxime W Lafarge (MW)

Department of Pathology and Molecular Pathology, University Hospital Zurich, University of Zurich, Zurich, Switzerland.

Viktor H Koelzer (VH)

Department of Pathology and Molecular Pathology, University Hospital Zurich, University of Zurich, Zurich, Switzerland.

Ziyue Wang (Z)

Harbin Institute of Technology, Shenzhen, China.

Yongbing Zhang (Y)

Harbin Institute of Technology, Shenzhen, China.

Sen Yang (S)

College of Biomedical Engineering, Sichuan University, Chengdu, China.

Xiyue Wang (X)

Department of Radiation Oncology, Stanford University School of Medicine, Palo Alto, USA.

Katharina Breininger (K)

Department Artificial Intelligence in Biomedical Engineering, Friedrich-Alexander-Universität Erlangen-Nürnberg, Erlangen, Germany.

Christof A Bertram (CA)

Institute of Pathology, University of Veterinary Medicine, Vienna, Austria.

Classifications MeSH