Real-time glioblastoma tumor microenvironment assessment by SpiderMass for improved patient management.

MALDI-IHC SpiderMass diagnosis glioblastoma imaging immunoscore lipids machine learning mass spectrometry prognosis

Journal

Cell reports. Medicine
ISSN: 2666-3791
Titre abrégé: Cell Rep Med
Pays: United States
ID NLM: 101766894

Informations de publication

Date de publication:
22 Mar 2024
Historique:
received: 14 09 2023
revised: 15 01 2024
accepted: 01 03 2024
medline: 30 3 2024
pubmed: 30 3 2024
entrez: 29 3 2024
Statut: aheadofprint

Résumé

Glioblastoma is a highly heterogeneous and infiltrative form of brain cancer associated with a poor outcome and limited therapeutic effectiveness. The extent of the surgery is related to survival. Reaching an accurate diagnosis and prognosis assessment by the time of the initial surgery is therefore paramount in the management of glioblastoma. To this end, we are studying the performance of SpiderMass, an ambient ionization mass spectrometry technology that can be used in vivo without invasiveness, coupled to our recently established artificial intelligence pipeline. We demonstrate that we can both stratify isocitrate dehydrogenase (IDH)-wild-type glioblastoma patients into molecular sub-groups and achieve an accurate diagnosis with over 90% accuracy after cross-validation. Interestingly, the developed method offers the same accuracy for prognosis. In addition, we are testing the potential of an immunoscoring strategy based on SpiderMass fingerprints, showing the association between prognosis and immune cell infiltration, to predict patient outcome.

Identifiants

pubmed: 38552622
pii: S2666-3791(24)00128-9
doi: 10.1016/j.xcrm.2024.101482
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

101482

Informations de copyright

Copyright © 2024 The Author(s). Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of interests É.L.R. has received grant research from Bristol Meyer Squibb and honoraria for lectures or advisory board from Bayer, Janssen, Leo Pharma, Pierre Fabre, Roche, Seattle Genetics, and Servier. M.S. and I.F. are inventors on a patent (priority number WO2015IB57301 20150922) related to part of the described protocol. D.Y., K.J.R., and M.J.L. are current employees of AmberGen, Inc., 44 Manning Road, Billerica, MA, USA. AmberGen, Inc., has filed patent applications on different aspects of MALDI-IHC.

Auteurs

Yanis Zirem (Y)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France.

Léa Ledoux (L)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France.

Lucas Roussel (L)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France.

Claude Alain Maurage (CA)

CHU Lille, Service de Biochimie et Biologie Moléculaire, 59000 Lille, France.

Pierre Tirilly (P)

Université de Lille, CNRS, Centrale Lille, UMR 9189 CRIStAL, 59000 Lille, France.

Émilie Le Rhun (É)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France; Departments of Neurosurgery and Neurology, Clinical Neuroscience Center, University Hospital of Zurich, University of Zurich, Zurich, Switzerland.

Bertrand Meresse (B)

Université de Lille, Inserm, CHU Lille, U1286 - INFINITE - Institute for Translational Research in Inflammation, 59000 Lille, France.

Gargey Yagnik (G)

AmberGen, Inc., Billerica, MA, USA.

Mark J Lim (MJ)

AmberGen, Inc., Billerica, MA, USA.

Kenneth J Rothschild (KJ)

AmberGen, Inc., Billerica, MA, USA; Department of Physics and Photonics Center, Boston University, Boston, MA, USA.

Marie Duhamel (M)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France.

Michel Salzet (M)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France; Institut Universitaire de France (IUF), Paris, France. Electronic address: michel.salzet@univ-lille.fr.

Isabelle Fournier (I)

Université de Lille, Inserm, CHU Lille, U1192 - Protéomique Réponse Inflammatoire Spectrométrie de Masse - PRISM, 59000 Lille, France; Institut Universitaire de France (IUF), Paris, France. Electronic address: isabelle.fournier@univ-lille.fr.

Classifications MeSH