Mining the microbiome of Lake Afdera to gain insights into microbial diversity and biosynthetic potential.
Lake Afdera
biosynthetic gene clusters
metagenomics
microbiome
secondary metabolites
shotgun sequencing
Journal
FEMS microbes
ISSN: 2633-6685
Titre abrégé: FEMS Microbes
Pays: England
ID NLM: 9918227365806676
Informations de publication
Date de publication:
2024
2024
Historique:
received:
02
09
2023
revised:
24
01
2024
accepted:
05
03
2024
medline:
1
4
2024
pubmed:
1
4
2024
entrez:
1
4
2024
Statut:
epublish
Résumé
Microorganisms inhabiting hypersaline environments have received significant attention due to their ability to thrive under poly-extreme conditions, including high salinity, elevated temperatures and heavy metal stress. They are believed to possess biosynthetic gene clusters (BGCs) that encode secondary metabolites as survival strategy and offer potential biotechnological applications. In this study, we mined BGCs in shotgun metagenomic sequences generated from Lake Afdera, a hypersaline lake in the Afar Depression, Ethiopia. The microbiome of Lake Afdera is predominantly bacterial, with
Identifiants
pubmed: 38560625
doi: 10.1093/femsmc/xtae008
pii: xtae008
pmc: PMC10979467
doi:
Types de publication
Journal Article
Langues
eng
Pagination
xtae008Informations de copyright
© The Author(s) 2024. Published by Oxford University Press on behalf of FEMS.
Déclaration de conflit d'intérêts
The authors declare that they have no competing interests