The lincRNA JUNI regulates the stress-dependent induction of c-Jun, cellular migration and survival through the modulation of the DUSP14-JNK axis.


Journal

Oncogene
ISSN: 1476-5594
Titre abrégé: Oncogene
Pays: England
ID NLM: 8711562

Informations de publication

Date de publication:
02 Apr 2024
Historique:
received: 22 01 2024
accepted: 26 03 2024
revised: 17 03 2024
medline: 3 4 2024
pubmed: 3 4 2024
entrez: 2 4 2024
Statut: aheadofprint

Résumé

Cancer cells employ adaptive mechanisms to survive various stressors, including genotoxic drugs. Understanding the factors promoting survival is crucial for developing effective treatments. In this study, we unveil a previously unexplored long non-coding RNA, JUNI (JUN-DT, LINC01135), which is upregulated by genotoxic drugs through the activation of stress-activated MAPKs, JNK, and p38 and consequently exerts positive control over the expression of its adjacent gene product c-Jun, a well-known oncoprotein, which transduces signals to multiple transcriptional outputs. JUNI regulates cellular migration and has a crucial role in conferring cellular resistance to chemotherapeutic drugs or UV radiation. Depletion of JUNI markedly increases the sensitivity of cultured cells and spheroids to chemotherapeutic agents. We identified 57 proteins interacting with JUNI. The activity of one of them the MAPK phosphatase and inhibitor, DUSP14, is counteracted by JUNI, thereby, facilitating efficient JNK phosphorylation and c-Jun induction when cells are exposed to UV radiation. The antagonistic interplay with DUSP14 contributes not only to c-Jun induction but also augments the survival of UV-exposed cells. In summary, we introduce JUNI as a novel stress-inducible regulator of c-Jun, positioning it as a potential target for enhancing the sensitivity of cancer cells to chemotherapy.

Identifiants

pubmed: 38565943
doi: 10.1038/s41388-024-03021-4
pii: 10.1038/s41388-024-03021-4
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Israel Cancer Association (ICA)
ID : 20220102

Informations de copyright

© 2024. The Author(s).

Références

Bhan A, Soleimani M, Mandal SS. Long noncoding RNA and cancer: a new paradigm. Cancer Res. 2017;77:3965–81.
pubmed: 28701486 pmcid: 8330958 doi: 10.1158/0008-5472.CAN-16-2634
Spizzo R, Almeida MI, Colombatti A, Calin GA. Long non-coding RNAs and cancer: a new frontier of translational research? Oncogene. 2012;31:4577–87.
pubmed: 22266873 pmcid: 3433647 doi: 10.1038/onc.2011.621
Chi Y, Wang D, Wang J, Yu W, Yang J. Long non-coding RNA in the pathogenesis of cancers. Cells. 2019;8:1015–59.
pubmed: 31480503 pmcid: 6770362 doi: 10.3390/cells8091015
Tan YT, Lin JF, Li T, Li JJ, Xu RH, Ju HQ. LncRNA-mediated posttranslational modifications and reprogramming of energy metabolism in cancer. Cancer Commun. 2021;41:109–20.
doi: 10.1002/cac2.12108
Gutschner T, Diederichs S. The hallmarks of cancer: a long non-coding RNA point of view. RNA Biol. 2012;9:703–19.
pubmed: 22664915 pmcid: 3495743 doi: 10.4161/rna.20481
McCabe EM, Rasmussen TP. lncRNA involvement in cancer stem cell function and epithelial-mesenchymal transitions. Semin Cancer Biol. 2021;75:38–48.
pubmed: 33346133 doi: 10.1016/j.semcancer.2020.12.012
Connerty P, Lock RB, de Bock CE. Long non-coding RNAs: major regulators of cell stress in cancer. Front Oncol. 2020;10:285.
pubmed: 32266130 pmcid: 7099402 doi: 10.3389/fonc.2020.00285
Tehrani SS, Karimian A, Parsian H, Majidinia M, Yousefi B. Multiple functions of long non-coding RNAs in oxidative stress, DNA damage response and cancer progression. J Cell Biochem. 2018;119:223–36.
pubmed: 28608608 doi: 10.1002/jcb.26217
Su M, Wang H, Wang W, Wang Y, Ouyang L, Pan C, et al. LncRNAs in DNA damage response and repair in cancer cells. Acta Biochim Biophys Sin. 2018;50:433–9.
pubmed: 29554194 doi: 10.1093/abbs/gmy022
Chen QN, Wei CC, Wang ZX, Sun M. Long non-coding RNAs in anti-cancer drug resistance. Oncotarget. 2017;8:1925–36.
pubmed: 27713133 doi: 10.18632/oncotarget.12461
Jackson SP, Bartek J. The DNA-damage response in human biology and disease. Nature. 2009;461:1071–8.
pubmed: 19847258 pmcid: 2906700 doi: 10.1038/nature08467
Devary Y, Gottlieb RA, Lau LF, Karin M. Rapid and preferential activation of the c-jun gene during the mammalian UV response. Mol Cell Biol. 1991;11:2804–11.
pubmed: 1901948 pmcid: 360059
Fuchs SY, Fried VA, Ronai Z. Stress-activated kinases regulate protein stability. Oncogene. 1998;17:1483–90.
pubmed: 9779995 doi: 10.1038/sj.onc.1202184
Karin M, Gallagher E. From JNK to pay dirt: jun kinases, their biochemistry, physiology and clinical importance. IUBMB Life. 2005;57:283–95.
pubmed: 16036612 doi: 10.1080/15216540500097111
Davis RJ. Signal transduction by the JNK group of MAP kinases. Cell. 2000;103:239–52.
pubmed: 11057897 doi: 10.1016/S0092-8674(00)00116-1
Stein B, Angel P, van Dam H, Ponta H, Herrlich P, van der Eb A, et al. Ultraviolet-radiation induced c-jun gene transcription: two AP-1 like binding sites mediate the response. Photochem Photobio. 1992;55:409–15.
doi: 10.1111/j.1751-1097.1992.tb04255.x
Ha J, Kang E, Seo J, Cho S. Phosphorylation dynamics of JNK signaling: effects of dual-specificity phosphatases (DUSPs) on the JNK pathway. Int J Mol Sci. 2019;20:6157–76.
pubmed: 31817617 pmcid: 6941053 doi: 10.3390/ijms20246157
Weston CR, Davis RJ. The JNK signal transduction pathway. Curr Opin Cell Biol. 2007;19:142–9.
pubmed: 17303404 doi: 10.1016/j.ceb.2007.02.001
Shaulian E, Karin M. AP-1 as a regulator of cell life and death. Nat Cell Biol. 2002;4:E131–136.
pubmed: 11988758 doi: 10.1038/ncb0502-e131
Hilberg F, Aguzzi A, Howells N, Wagner EF. c-jun is essential for normal mouse development and hepatogenesis. Nature. 1993;365:179–81.
pubmed: 8371760 doi: 10.1038/365179a0
Eferl R, Ricci R, Kenner L, Zenz R, David JP, Rath M, et al. Liver tumor development. c-Jun antagonizes the proapoptotic activity of p53. Cell. 2003;112:181–92.
pubmed: 12553907 doi: 10.1016/S0092-8674(03)00042-4
Fallahi-Sichani M, Moerke NJ, Niepel M, Zhang T, Gray NS, Sorger PK. Systematic analysis of BRAF(V600E) melanomas reveals a role for JNK/c-Jun pathway in adaptive resistance to drug-induced apoptosis. Mol Syst Biol. 2015;11:797.
pubmed: 25814555 doi: 10.15252/msb.20145877
Ramsdale R, Jorissen RN, Li FZ, Al-Obaidi S, Ward T, Sheppard KE, et al. The transcription cofactor c-JUN mediates phenotype switching and BRAF inhibitor resistance in melanoma. Sci Signal. 2015;8:ra82.
pubmed: 26286024 doi: 10.1126/scisignal.aab1111
Titz B, Lomova A, Le A, Hugo W, Kong X, Ten Hoeve J, et al. JUN dependency in distinct early and late BRAF inhibition adaptation states of melanoma. Cell Discov. 2016;2:16028.
pubmed: 27648299 pmcid: 5012007 doi: 10.1038/celldisc.2016.28
Volders PJ, Anckaert J, Verheggen K, Nuytens J, Martens L, Mestdagh P, et al. LNCipedia 5: towards a reference set of human long non-coding RNAs. Nucleic Acids Res. 2019;47:D135–D139.
pubmed: 30371849 doi: 10.1093/nar/gky1031
Angel P, Hattori K, Smeal T, Karin M. The jun proto-oncogene is positively autoregulated by its product, Jun/AP-1. Cell. 1988;55:875–85.
pubmed: 3142689 doi: 10.1016/0092-8674(88)90143-2
Vleugel MM, Greijer AE, Bos R, van der Wall E, van Diest PJ. c-Jun activation is associated with proliferation and angiogenesis in invasive breast cancer. Hum Pathol. 2006;37:668–74.
pubmed: 16733206 doi: 10.1016/j.humpath.2006.01.022
Bunch H, Choe H, Kim J, Jo DS, Jeon S, Lee S, et al. P-TEFb Regulates Transcriptional Activation in Non-coding RNA Genes. Front Genet. 2019;10:342.
pubmed: 31068966 pmcid: 6491683 doi: 10.3389/fgene.2019.00342
Kopp F, Mendell JT. Functional classification and experimental dissection of long noncoding RNAs. Cell. 2018;172:393–407.
pubmed: 29373828 pmcid: 5978744 doi: 10.1016/j.cell.2018.01.011
Wisdom R, Johnson RS, Moore C. c-Jun regulates cell cycle progression and apoptosis by distinct mechanisms. EMBO J. 1999;18:188–97.
pubmed: 9878062 pmcid: 1171114 doi: 10.1093/emboj/18.1.188
Gil N, Ulitsky I. Regulation of gene expression by cis-acting long non-coding RNAs. Nat Rev Genet. 2020;21:102–17.
pubmed: 31729473 doi: 10.1038/s41576-019-0184-5
Li JH, Liu S, Zhou H, Qu LH, Yang JH. starBase v2.0: decoding miRNA-ceRNA, miRNA-ncRNA and protein-RNA interaction networks from large-scale CLIP-Seq data. Nucleic Acids Res. 2014;42:D92–97.
pubmed: 24297251 doi: 10.1093/nar/gkt1248
Zhao C, Qiao Y, Jonsson P, Wang J, Xu L, Rouhi P, et al. Genome-wide profiling of AP-1-regulated transcription provides insights into the invasiveness of triple-negative breast cancer. Cancer Res. 2014;74:3983–94.
pubmed: 24830720 doi: 10.1158/0008-5472.CAN-13-3396
Thakur N, Gudey SK, Marcusson A, Fu JY, Bergh A, Heldin CH, et al. TGFbeta-induced invasion of prostate cancer cells is promoted by c-Jun-dependent transcriptional activation of Snail1. Cell Cycle. 2014;13:2400–14.
pubmed: 25483191 pmcid: 4128885 doi: 10.4161/cc.29339
Jiao X, Katiyar S, Liu M, Mueller SC, Lisanti MP, Li A, et al. Disruption of c-Jun reduces cellular migration and invasion through inhibition of c-Src and hyperactivation of ROCK II kinase. Mol Biol Cell. 2008;19:1378–90.
pubmed: 18216279 pmcid: 2291431 doi: 10.1091/mbc.e07-08-0753
Lin G, Yu B, Liang Z, Li L, Qu S, Chen K, et al. Silencing of c-jun decreases cell migration, invasion, and EMT in radioresistant human nasopharyngeal carcinoma cell line CNE-2R. Onco Targets Ther. 2018;11:3805–15.
pubmed: 30013361 pmcid: 6038861 doi: 10.2147/OTT.S162700
Sioletic S, Czaplinski J, Hu L, Fletcher JA, Fletcher CD, Wagner AJ, et al. c-Jun promotes cell migration and drives expression of the motility factor ENPP2 in soft tissue sarcomas. J Pathol. 2014;234:190–202.
pubmed: 24852265 pmcid: 4472460 doi: 10.1002/path.4379
Xia Y, Karin M. The control of cell motility and epithelial morphogenesis by Jun kinases. Trends Cell Biol. 2004;14:94–101.
pubmed: 15102441 doi: 10.1016/j.tcb.2003.12.005
Brabletz T, Kalluri R, Nieto MA, Weinberg RA. EMT in cancer. Nat Rev Cancer. 2018;18:128–34.
pubmed: 29326430 doi: 10.1038/nrc.2017.118
Shibue T, Weinberg RA. EMT, CSCs, and drug resistance: the mechanistic link and clinical implications. Nat Rev Clin Oncol. 2017;14:611–29.
pubmed: 28397828 pmcid: 5720366 doi: 10.1038/nrclinonc.2017.44
Graindorge A, Pinheiro I, Nawrocka A, Mallory AC, Tsvetkov P, Gil N, et al. In-cell identification and measurement of RNA-protein interactions. Nat Commun. 2019;10:5317.
pubmed: 31757954 pmcid: 6876571 doi: 10.1038/s41467-019-13235-w
Marti F, Krause A, Post NH, Lyddane C, Dupont B, Sadelain M, et al. Negative-feedback regulation of CD28 costimulation by a novel mitogen-activated protein kinase phosphatase, MKP6. J Immunol. 2001;166:197–206.
pubmed: 11123293 doi: 10.4049/jimmunol.166.1.197
Yang CY, Li JP, Chiu LL, Lan JL, Chen DY, Chuang HC, et al. Dual-specificity phosphatase 14 (DUSP14/MKP6) negatively regulates TCR signaling by inhibiting TAB1 activation. J Immunol. 2014;192:1547–57.
pubmed: 24403530 doi: 10.4049/jimmunol.1300989
Rockx DA, Mason R, van Hoffen A, Barton MC, Citterio E, Bregman DB, et al. UV-induced inhibition of transcription involves repression of transcription initiation and phosphorylation of RNA polymerase II. Proc Natl Acad Sci USA. 2000;97:10503–8.
pubmed: 10973477 pmcid: 27054 doi: 10.1073/pnas.180169797
Williamson L, Saponaro M, Boeing S, East P, Mitter R, Kantidakis T, et al. UV Irradiation Induces a Non-coding RNA that Functionally Opposes the Protein Encoded by the Same Gene. Cell. 2017;168:843–855.e813.
pubmed: 28215706 pmcid: 5332558 doi: 10.1016/j.cell.2017.01.019
Fu L, Peng S, Wu W, Ouyang Y, Tan D, Fu X. LncRNA HOTAIRM1 promotes osteogenesis by controlling JNK/AP-1 signalling-mediated RUNX2 expression. J Cell Mol Med. 2019;23:7517–24.
pubmed: 31512358 pmcid: 6815819 doi: 10.1111/jcmm.14620
Li H, Liu X, Zhang L, Li X. LncRNA BANCR facilitates vascular smooth muscle cell proliferation and migration through JNK pathway. Oncotarget. 2017;8:114568–75.
pubmed: 29383102 pmcid: 5777714 doi: 10.18632/oncotarget.21603
Li L, Li Z, Meng X, Wang X, Song D, Liu Y, et al. Histone lactylation-derived LINC01127 promotes the self-renewal of glioblastoma stem cells via the cis-regulating the MAP4K4 to activate JNK pathway. Cancer Lett. 2023;579:216467.
pubmed: 38084701 doi: 10.1016/j.canlet.2023.216467
Wang K, Zhong W, Long Z, Guo Y, Zhong C, Yang T, et al. 5-Methylcytosine RNA methyltransferases-related long non-coding RNA to develop and validate biochemical recurrence signature in prostate cancer. Front Mol Biosci. 2021;8:775304.
pubmed: 34926580 pmcid: 8672116 doi: 10.3389/fmolb.2021.775304
Wu L, Zhan Q, Liu P, Zheng H, Liu M, Min J, et al. LncRNA TCONS_00145741 knockdown prevents thrombin-induced M1 differentiation of microglia in intracerebral hemorrhage by enhancing the interaction between DUSP6 and JNK. Front Cell Dev Biol. 2021;9:684842.
pubmed: 35127692 doi: 10.3389/fcell.2021.684842
Potapova O, Basu S, Mercola D, Holbrook NJ. Protective role for c-Jun in the cellular response to DNA damage. J Biol Chem. 2001;276:28546–53.
pubmed: 11352915 doi: 10.1074/jbc.M102075200
Hayakawa J, Mittal S, Wang Y, Korkmaz KS, Adamson E, English C, et al. Identification of promoters bound by c-Jun/ATF2 during rapid large-scale gene activation following genotoxic stress. Mol Cell. 2004;16:521–35.
pubmed: 15546613 doi: 10.1016/j.molcel.2004.10.024
Tournier C, Hess P, Yang DD, Xu J, Turner TK, Nimnual A, et al. Requirement of JNK for stress-induced activation of the cytochrome c-mediated death pathway. Science. 2000;288:870–4.
pubmed: 10797012 doi: 10.1126/science.288.5467.870
Wu Q, Wu W, Fu B, Shi L, Wang X, Kuca K. JNK signaling in cancer cell survival. Med Res Rev. 2019;39:2082–104.
pubmed: 30912203 doi: 10.1002/med.21574
Sample A, He YY. Autophagy in UV damage response. Photochem Photobio. 2017;93:943–55.
doi: 10.1111/php.12691
Douglas T, Saleh M. Post-translational modification of OTULIN regulates ubiquitin dynamics and cell death. Cell Rep. 2019;29:3652–3663.e3655.
pubmed: 31825842 doi: 10.1016/j.celrep.2019.11.014

Auteurs

Vikash Kumar (V)

Department of Biochemistry and Molecular Biology, Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, 9112102, Jerusalem, Israel.

Xavier Sabaté-Cadenas (X)

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934, Paris, 75005, France.
Department of Medicine and Life Sciences, Universitat Pompeu Fabra, 08003, Barcelona, Spain.

Isha Soni (I)

Department of Biochemistry and Molecular Biology, Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, 9112102, Jerusalem, Israel.

Esther Stern (E)

Department of Biochemistry and Molecular Biology, Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, 9112102, Jerusalem, Israel.
Gene Therapy Institute, Hadassah Hebrew University Medical Center and Faculty of Medicine, Hebrew University, Jerusalem, 9112102, Israel.

Carine Vias (C)

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934, Paris, 75005, France.

Doron Ginsberg (D)

The Mina and Everard Goodman, Faculty of Life Science, Bar-Ilan University, Ramat Gan, Israel.

Carlos Romá-Mateo (C)

Department of Physiology, Facultat de Medicina i Odontologia, Universitat de València & Fundación Instituto de Investigación Sanitaria INCLIVA, 46010, Valencia, Spain.

Rafael Pulido (R)

Biobizkaia Health Research Institute, Barakaldo, 48903 Spain; & Ikerbasque, The Basque Foundation for Science, 48009, Bilbao, Spain.

Martin Dodel (M)

Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, John Vane Science Centre, Charterhouse Square, London, EC1M 6BQ, UK.

Faraz K Mardakheh (FK)

Centre for Cancer Cell and Molecular Biology, Barts Cancer Institute, Queen Mary University of London, John Vane Science Centre, Charterhouse Square, London, EC1M 6BQ, UK.

Alena Shkumatava (A)

Institut Curie, PSL Research University, CNRS UMR3215, INSERM U934, Paris, 75005, France.
Institute of Cell Biology, University of Edinburgh, Edinburgh, EH9 3BF, UK.

Eitan Shaulian (E)

Department of Biochemistry and Molecular Biology, Institute for Medical Research Israel-Canada, Faculty of Medicine, Hebrew University of Jerusalem, 9112102, Jerusalem, Israel. eitansh@ekmd.huji.ac.il.

Classifications MeSH