A comparative study of CARE 2D and N2V 2D for tissue-specific denoising in second harmonic generation imaging.

ECM imaging SHG microscopy deep learning denoising image restoration myosin imaging

Journal

Journal of biophotonics
ISSN: 1864-0648
Titre abrégé: J Biophotonics
Pays: Germany
ID NLM: 101318567

Informations de publication

Date de publication:
02 Apr 2024
Historique:
revised: 11 03 2024
received: 27 12 2023
accepted: 17 03 2024
medline: 3 4 2024
pubmed: 3 4 2024
entrez: 3 4 2024
Statut: aheadofprint

Résumé

This study explored the application of deep learning in second harmonic generation (SHG) microscopy, a rapidly growing area. This study focuses on the impact of glycerol concentration on image noise in SHG microscopy and compares two image restoration techniques: Noise-to-Void 2D (N2V 2D, no reference image restoration) and content-aware image restoration (CARE 2D, full reference image restoration). We demonstrated that N2V 2D effectively restored the images affected by high glycerol concentrations. To reduce sample exposure and damage, this study further addresses low-power SHG imaging by reducing the laser power by 70% using deep learning techniques. CARE 2D excels in preserving detailed structures, whereas N2V 2D maintains natural muscle structure. This study highlights the strengths and limitations of these models in specific SHG microscopy applications, offering valuable insights and potential advancements in the field .

Identifiants

pubmed: 38566461
doi: 10.1002/jbio.202300565
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e202300565

Subventions

Organisme : the Natural Sciences and Engineering Research Council of Canada, the New Frontiers Research Fund
Organisme : Fonds de recherche du Québec - Nature et technologies
Organisme : Canadian Cancer Society
ID : 707140
Organisme : NSERC CREATE program
Organisme : Epstein Fellowship in Women's Health (Faculty of Medicine, McGill University)
Organisme : Fonds de Recherche du Québec - Santé
Organisme : Canada Foundation for Innovation

Informations de copyright

© 2024 The Authors. Journal of Biophotonics published by Wiley‐VCH GmbH.

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Auteurs

Arash Aghigh (A)

Centre Énergie Matériaux Télécommunications, Institut National de la Recherche Scientifique, Varennes, Québec, Canada.

Gaëtan Jargot (G)

Centre Énergie Matériaux Télécommunications, Institut National de la Recherche Scientifique, Varennes, Québec, Canada.

Charlotte Zaouter (C)

Armand-Frappier Santé Biotechnologie Research Centre, Laval, Québec, Canada.

Samuel E J Preston (SEJ)

Department of Experimental Medicine, Faculty of Medicine, McGill University, Montréal, Québec, Canada.
Gerald Bronfman Department of Oncology, Segal Cancer Centre, Lady Davis Institute and Jewish General Hospital, McGill University, Montréal, Québec, Canada.

Melika Saadat Mohammadi (MS)

Centre Énergie Matériaux Télécommunications, Institut National de la Recherche Scientifique, Varennes, Québec, Canada.

Heide Ibrahim (H)

Centre Énergie Matériaux Télécommunications, Institut National de la Recherche Scientifique, Varennes, Québec, Canada.

Sonia V Del Rincón (SV)

Department of Experimental Medicine, Faculty of Medicine, McGill University, Montréal, Québec, Canada.
Gerald Bronfman Department of Oncology, Segal Cancer Centre, Lady Davis Institute and Jewish General Hospital, McGill University, Montréal, Québec, Canada.

Kessen Patten (K)

Armand-Frappier Santé Biotechnologie Research Centre, Laval, Québec, Canada.

François Légaré (F)

Centre Énergie Matériaux Télécommunications, Institut National de la Recherche Scientifique, Varennes, Québec, Canada.

Classifications MeSH