The use of SNP markers for cattle breed identification.
Bos Taurus
Breed assignment
Genetic diversity
Native breeds
Population structure
Journal
Journal of applied genetics
ISSN: 2190-3883
Titre abrégé: J Appl Genet
Pays: England
ID NLM: 9514582
Informations de publication
Date de publication:
03 Apr 2024
03 Apr 2024
Historique:
received:
13
04
2023
accepted:
12
03
2024
revised:
10
11
2023
medline:
3
4
2024
pubmed:
3
4
2024
entrez:
3
4
2024
Statut:
aheadofprint
Résumé
A potential application of single nucleotide polymorphisms (SNPs) in animal husbandry and production is identification of the animal breed. In this study, using chosen marker selection methods and genotypic data obtained with the use of Illumina Bovine SNP50 BeadChip for individuals belonging to ten cattle breeds, the reduced panels containing the most informative SNP markers were developed. The suitability of selected SNP panels for the effective and reliable assignment of the studied individuals to the breed of origin was checked by three allocation algorithms implemented in GeneClass 2. The studied breeds set included both Polish-native breeds under the genetic resources conservation programs and highly productive breeds with a global range. For all of the tested marker selection methods ("delta" and two F
Identifiants
pubmed: 38568414
doi: 10.1007/s13353-024-00857-0
pii: 10.1007/s13353-024-00857-0
doi:
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Narodowe Centrum Badań i Rozwoju
ID : BIOSTRATEG2/297267/14/NCBR/2016
Informations de copyright
© 2024. The Author(s), under exclusive licence to Institute of Plant Genetics Polish Academy of Sciences.
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