Genetics and Genomics of Pulmonary Fibrosis: Charting the Molecular Landscape and Shaping Precision Medicine.

Genetic Variants Interstitial Lung Diseases MUC5B Promoter Variant Precision Medicine Pulmonary Fibrosis

Journal

American journal of respiratory and critical care medicine
ISSN: 1535-4970
Titre abrégé: Am J Respir Crit Care Med
Pays: United States
ID NLM: 9421642

Informations de publication

Date de publication:
04 Apr 2024
Historique:
medline: 4 4 2024
pubmed: 4 4 2024
entrez: 4 4 2024
Statut: aheadofprint

Résumé

Recent genetic and genomic advancements have elucidated the complex etiology of idiopathic pulmonary fibrosis (IPF) and other progressive fibrotic interstitial lung diseases (ILDs), emphasizing the contribution of heritable factors. This state-of-the-art review synthesizes evidence on significant genetic contributors to pulmonary fibrosis (PF), including rare genetic variants and common single nucleotide polymorphisms (SNPs). The MUC5B promoter variant is unusual, a common SNP that markedly elevates the risk of early and established PF. We address the utility of genetic variation in enhancing understanding of disease pathogenesis, clinical phenotypes, improving disease definitions, and informing prognosis and treatment response. Critical research gaps are highlighted, particularly the underrepresentation of non-European ancestries in PF genetic studies and the exploration of PF phenotypes beyond usual interstitial pneumonia (UIP)/IPF. We discuss the role of telomere length, often critically short in PF, and its link to progression and mortality, underscoring the genetic complexity involving telomere biology genes (TERT, TERC) and others like SFTPC and MUC5B. Additionally, we address the potential of gene-by-environment interactions to modulate disease manifestation, advocating for precision medicine in PF. Insights from gene expression profiling studies and multi-omic analyses highlight the promise for understanding disease pathogenesis and offer new approaches to clinical care, therapeutic drug development, and biomarker discovery. Finally, we discuss the ethical, legal, and social implications of genomic research and therapies in PF, stressing the need for sound practices and informed clinical genetic discussions. Looking forward, we advocate for comprehensive genetic testing panels and polygenic risk scores to improve the management of PF and related ILDs across diverse populations.

Identifiants

pubmed: 38573068
doi: 10.1164/rccm.202401-0238SO
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Auteurs

Ayodeji Adegunsoye (A)

University of Chicago, Section of Pulmonary and Critical Care, Dept. of Medicine, Chicago, Illinois, United States; deji@uchicago.edu.

Jonathan A Kropski (JA)

Vanderbilt University Medical Center, 12328, Nashville, Tennessee, United States.

Juergen Behr (J)

University of Munich, Department of Internal Medicine V, Munich, Germany.

Timothy S Blackwell (TS)

Vanderbilt University, Nashville, Tennessee, United States.

Tamera J Corte (TJ)

Royal Prince Alfred Hospital, Department of Respiratory Medicine, Sydney, New South Wales, Australia.
University of Sydney, 4334, Medical School, Sydney, New South Wales, Australia.

Vincent Cottin (V)

Louis Pradel University Hospital, Respiratory Medicine, Lyon, France.

Allan Glanville (A)

St Vincent's Hospital, Respiratory and Sleep Medicine, Sydney, New South Wales, Australia.

Marilyn K Glassberg (MK)

Loyola University Chicago Stritch School of Medicine, 12248, Medicine, Maywood, Illinois, United States.

Matthias Griese (M)

Ludwig-Maximilians-University, Munich, United States.

Gary M Hunninghake (GM)

Brigham and Women's Hospital, 1861, Medicine, Boston, Massachusetts, United States.

Kerri A Johannson (KA)

University of Calgary, Calgary, Alberta, Canada.

Michael P Keane (MP)

University College Dublin, 8797, Dublin, Ireland.

John S Kim (JS)

University of Virginia, 2358, Medicine, Charlottesville, Virginia, United States.

Martin Kolb (M)

McMaster University, Hamilton, Ontario, Canada.

Toby M Maher (TM)

University of Southern California Keck School of Medicine, 12223, PCCSM, Los Angeles, California, United States.

Justin M Oldham (JM)

University of California Davis, 8789, Pulmonary and Critical Care Medicine, Davis, California, United States.

Anna J Podolanczuk (AJ)

Weill Cornell Medical College, 12295, Department of Medicine, New York, New York, United States.

Ivan O Rosas (IO)

Brigham and Women's Hospital, 1861, Department of Medicine, Division of Pulmonary and Critical Care Medicine, Boston, Massachusetts, United States.

Fernando J Martinez (FJ)

Cornell Medical College, New York, New York, United States.

Imre Noth (I)

University of Virginia, 2358, Division of Pulmonary and Critical Care Medicine, Charlottesville, Virginia, United States.

David A Schwartz (DA)

University of Colorado, School of Medicine, Department of Medicine, Aurora, Colorado, United States.

Classifications MeSH