Comprehensive Molecular Profiling of NPM1-Mutated Acute Myeloid Leukemia Using RNAseq Approach.

NPM1 RNA/DNA variant calling acute myeloid leukemia next-generation sequencing

Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
24 Mar 2024
Historique:
received: 22 02 2024
revised: 18 03 2024
accepted: 22 03 2024
medline: 13 4 2024
pubmed: 13 4 2024
entrez: 13 4 2024
Statut: epublish

Résumé

Acute myeloid leukemia (AML) is a complex hematologic malignancy with high morbidity and mortality. Nucleophosmin 1 (NPM1) mutations occur in approximately 30% of AML cases, and NPM1-mutated AML is classified as a distinct entity. NPM1-mutated AML patients without additional genetic abnormalities have a favorable prognosis. Despite this, 30-50% of them experience relapse. This study aimed to investigate the potential of total RNAseq in improving the characterization of NPM1-mutated AML patients. We explored genetic variations independently of myeloid stratification, revealing a complex molecular scenario. We showed that total RNAseq enables the uncovering of different genetic alterations and clonal subtypes, allowing for a comprehensive evaluation of the real expression of exome transcripts in leukemic clones and the identification of aberrant fusion transcripts. This characterization may enhance understanding and guide improved treatment strategies for NPM1mut AML patients, contributing to better outcomes. Our findings underscore the complexity of NPM1-mutated AML, supporting the incorporation of advanced technologies for precise risk stratification and personalized therapeutic strategies. The study provides a foundation for future investigations into the clinical implications of identified genetic variations and highlights the importance of evolving diagnostic approaches in leukemia management.

Identifiants

pubmed: 38612443
pii: ijms25073631
doi: 10.3390/ijms25073631
pii:
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Fondazione CRT
ID : 2020.0757
Organisme : Bank of Italy
ID : 1288699/21

Auteurs

Jessica Petiti (J)

Division of Advanced Materials Metrology and Life Sciences, Istituto Nazionale di Ricerca Metrologica (INRiM), 10135 Turin, Italy.

Ymera Pignochino (Y)

Department of Clinical and Biological Sciences, University of Turin, 10043 Orbassano, Italy.
Candiolo Cancer Institute, FPO-IRCCS, 10060 Candiolo, Italy.

Aurora Schiavon (A)

Department of Clinical and Biological Sciences, University of Turin, 10043 Orbassano, Italy.

Emilia Giugliano (E)

Clinical and Microbiological Analysis Laboratory, San Luigi Gonzaga Hospital, 10043 Orbassano, Italy.

Enrico Berrino (E)

Candiolo Cancer Institute, FPO-IRCCS, 10060 Candiolo, Italy.
Department of Medical Sciences, University of Turin, 10126 Turin, Italy.

Giorgia Giordano (G)

Candiolo Cancer Institute, FPO-IRCCS, 10060 Candiolo, Italy.
Department of Oncology, University of Turin, 10043 Orbassano, Italy.

Federico Itri (F)

Department of Clinical and Biological Sciences, University of Turin, 10043 Orbassano, Italy.

Matteo Dragani (M)

Division of Hematology and Cellular Therapies, San Martino Hospital, IRCCS, 16132 Genova, Italy.

Daniela Cilloni (D)

Department of Clinical and Biological Sciences, University of Turin, 10043 Orbassano, Italy.

Marco Lo Iacono (M)

Department of Clinical and Biological Sciences, University of Turin, 10043 Orbassano, Italy.

Classifications MeSH