Fluorometric Measurement of Calmodulin-Dependent Peptide-Protein Interactions Using Dansylated Calmodulin.

CaM-target Calcium dependency Dansyl-Calmodulin Dansyl-chloride Peptide Protein Steady-state fluorescence spectroscopy

Journal

Bio-protocol
ISSN: 2331-8325
Titre abrégé: Bio Protoc
Pays: United States
ID NLM: 101635102

Informations de publication

Date de publication:
05 Apr 2024
Historique:
received: 20 11 2023
revised: 07 02 2024
accepted: 07 02 2024
medline: 15 4 2024
pubmed: 15 4 2024
entrez: 15 4 2024
Statut: epublish

Résumé

The assessment of peptide-protein interactions is a pivotal aspect of studying the functionality and mechanisms of various bioactive peptides. In this context, it is essential to employ methods that meet specific criteria, including sensitivity, biocompatibility, versatility, simplicity, and the ability to offer real-time monitoring. In cellular contexts, only a few proteins naturally possess inherent fluorescence, specifically those containing aromatic amino acids, particularly tryptophan. Nonetheless, by covalently attaching fluorescent markers, almost all proteins can be modified for monitoring purposes. Among the early extrinsic fluorescent probes designed for this task, dansyl chloride (DNSC) is a notable option due to its versatile nature and reliable performance. DNSC has been the primary choice as a fluorogenic derivatizing reagent for analyzing amino acids in proteins and peptides for an extended period of time. In our work, we have effectively utilized the distinctive properties of dansylated-calmodulin (D-CaM) for monitoring the interaction dynamics between proteins and peptides, particularly in the context of their association with calmodulin (CaM), a calcium-dependent regulatory protein. This technique not only enables us to scrutinize the affinity of diverse ligands but also sheds light on the intricate role played by calcium in these interactions. Key features • Dynamic fluorescence and real-time monitoring: dansyl-modified CaM enables sensitive, real-time fluorescence, providing valuable insights into the dynamics of molecular interactions and ligand binding. • Selective interaction and stable fluorescent adducts: DNSC selectively interacts with primary amino groups, ensuring specific detection and forming stable fluorescent sulfonamide adducts. • Versatility in research and ease of identification: D-CaM is a versatile tool in biological research, facilitating identification, precise quantification, and drug assessment for therapeutic development. • Sensitivity to surrounding alterations: D-CaM exhibits sensitivity to its surroundings, particularly ligand-induced changes, offering subtle insights into molecular interactions and environmental influences.

Identifiants

pubmed: 38618173
doi: 10.21769/BioProtoc.4963
pii: e4963
pmc: PMC11006803
doi:

Types de publication

Journal Article

Langues

eng

Pagination

e4963

Informations de copyright

©Copyright : © 2024 The Authors; This is an open access article under the CC BY license.

Déclaration de conflit d'intérêts

Competing interestsThe authors declare that they have no competing interests.

Auteurs

Eider Nuñez (E)

Instituto Biofisika, CSIC-UPV/EHU, Leioa, Spain.

Arantza Muguruza-Montero (A)

Instituto Biofisika, CSIC-UPV/EHU, Leioa, Spain.

Sara M Alicante (SM)

Instituto Biofisika, CSIC-UPV/EHU, Leioa, Spain.

Alvaro Villarroel (A)

Instituto Biofisika, CSIC-UPV/EHU, Leioa, Spain.

Classifications MeSH