Noncontiguous operon atlas for the

Staphylococcus aureus antisense transcription excludon menaquinone synthesis noncontiguous operon overlapping transcription

Journal

microLife
ISSN: 2633-6693
Titre abrégé: Microlife
Pays: England
ID NLM: 9918227365406676

Informations de publication

Date de publication:
2024
Historique:
received: 11 11 2023
revised: 20 03 2024
accepted: 08 04 2024
medline: 23 4 2024
pubmed: 23 4 2024
entrez: 23 4 2024
Statut: epublish

Résumé

Bacteria synchronize the expression of genes with related functions by organizing genes into operons so that they are cotranscribed together in a single polycistronic messenger RNA. However, some cellular processes may benefit if the simultaneous production of the operon proteins coincides with the inhibition of the expression of an antagonist gene. To coordinate such situations, bacteria have evolved noncontiguous operons (NcOs), a subtype of operons that contain one or more genes that are transcribed in the opposite direction to the other operon genes. This structure results in overlapping transcripts whose expression is mutually repressed. The presence of NcOs cannot be predicted computationally and their identification requires a detailed knowledge of the bacterial transcriptome. In this study, we used direct RNA sequencing methodology to determine the NcOs map in the

Identifiants

pubmed: 38651166
doi: 10.1093/femsml/uqae007
pii: uqae007
pmc: PMC11034616
doi:

Types de publication

Journal Article

Langues

eng

Pagination

uqae007

Informations de copyright

© The Author(s) 2024. Published by Oxford University Press on behalf of FEMS.

Déclaration de conflit d'intérêts

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Auteurs

Pablo Iturbe (P)

Laboratory of Microbial Pathogenesis, Navarrabiomed-Universidad Pública de Navarra (UPNA)-Hospital Universitario de Navarra (HUN), IdiSNA, Irunlarrea 3, Pamplona, 31008 Navarra, Spain.

Alvaro San Martín (AS)

Laboratory of Microbial Pathogenesis, Navarrabiomed-Universidad Pública de Navarra (UPNA)-Hospital Universitario de Navarra (HUN), IdiSNA, Irunlarrea 3, Pamplona, 31008 Navarra, Spain.

Hiroshi Hamamoto (H)

Faculty of Medicine, Department of Infectious diseases, Yamagata University, 2-2-2 Lida-Nishi, 990-9585 Yamagata, Japan.

Marina Marcet-Houben (M)

Barcelona Supercomputing Centre (BSC-CNS). Plaça Eusebi Güell, 1-3, 08034 Barcelona, Spain.
Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, 08028 Barcelona, Spain.

Toni Galbaldón (T)

Barcelona Supercomputing Centre (BSC-CNS). Plaça Eusebi Güell, 1-3, 08034 Barcelona, Spain.
Institute for Research in Biomedicine (IRB Barcelona), The Barcelona Institute of Science and Technology, Baldiri Reixac, 10, 08028 Barcelona, Spain.
Catalan Institution for Research and Advanced Studies (ICREA), 08010 Barcelona, Spain.
CIBER de Enfermedades Infecciosas, Instituto de Salud Carlos III, 28029 Madrid, Spain.

Cristina Solano (C)

Laboratory of Microbial Pathogenesis, Navarrabiomed-Universidad Pública de Navarra (UPNA)-Hospital Universitario de Navarra (HUN), IdiSNA, Irunlarrea 3, Pamplona, 31008 Navarra, Spain.

Iñigo Lasa (I)

Laboratory of Microbial Pathogenesis, Navarrabiomed-Universidad Pública de Navarra (UPNA)-Hospital Universitario de Navarra (HUN), IdiSNA, Irunlarrea 3, Pamplona, 31008 Navarra, Spain.

Classifications MeSH